DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and doc2a

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_073800319.1 Gene:doc2a / 558815 ZFINID:ZDB-GENE-090706-1 Length:486 Species:Danio rerio


Alignment Length:278 Identity:95/278 - (34%)
Similarity:139/278 - (50%) Gaps:45/278 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 DKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPD--KKKKFETKV 248
            |......||.|.|:|.|:..::||..|:|:|:.|..:|..|.:|||||::|||.  |..|.:||.
Zfish   161 DSDDSTALGTLEFELRYEKATSSLNCTIIRAKGLKPMDFNGLADPYVKLHLLPGACKANKLKTKT 225

  Fly   249 HRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQT------ 307
            .|.:|:||:|||.|:..:...|...|||..::.|.|:.:.::.|||.:|.|..:...||      
Zfish   226 VRNSLNPVWNETLTYVGITEEDMHRKTLRLSVCDEDKLTHNEFIGESRVALRRVKPDQTKRFYTC 290

  Fly   308 -----------------------IEEWRDLVSVEGEGGQEKLGDICFSLRYVP---------TAG 340
                                   :.||.:    |.....|:.|.:..||:::|         ..|
Zfish   291 LEHPPPLPSPTAMGAALRGISCYLREWEN----EQMTSLEERGRLLLSLQFLPPPAEGEGESRRG 351

  Fly   341 KLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQI 405
            .|.|.:|...:|..|||.|.|||||||.:..:.|:..|.|||:.|.||||.:||.|.:|:...::
Zfish   352 GLCVGVLRCAHLAAMDVNGFSDPYVKIYLKPDVKKKSKHKTSVIKKTLNPEFNEEFFYEISLSEL 416

  Fly   406 QKICLVVTVVDYDRIGTS 423
            ....|.|||.||| :|.|
Zfish   417 VHKTLEVTVWDYD-LGRS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 49/154 (32%)
C2B_Synaptotagmin-1 326..461 CDD:176047 43/107 (40%)
doc2aXP_073800319.1 None
Blue background indicates that the domain is not in the aligned region.

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