DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and sytl4

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001074457.1 Gene:sytl4 / 553322 ZFINID:ZDB-GENE-070209-217 Length:689 Species:Danio rerio


Alignment Length:548 Identity:131/548 - (23%)
Similarity:218/548 - (39%) Gaps:123/548 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ASEPAADLESVD---QKLEETHHSKFREVDRQEQEVLAEKAAEAASQRIAQVESTTRSATTEAQE 81
            :|.|..||..|.   :.|.:.|.:. .|:...:.|:...:||.....|:..:....:|:..|.:|
Zfish   130 SSAPGHDLVRVSLRKRPLSKKHETA-GEILLNKVELNTSQAAPVPKPRLKDIALANKSSLLEGEE 193

  Fly    82 STTTAVPVIKKI----EHVGEVVTEVIAE-------RTGLPTWGVVAIIILVF------LVVFGI 129
            ...:....|:|.    :|.....:....:       |...|....|:|::...      .:....
Zfish   194 GQQSDTESIEKASLDSDHAETKFSHSTPQMQRKEELRANSPEDCAVSILMSTVNSDSTATIETAS 258

  Fly   130 IFFCVRRFLKKRRTKDGKGKKGV-------DMKSVQLLG--SAYKEKVQPDMEELTE-----NAE 180
            :...:.......|..||..||.|       ::|....|.  ....|...|.|.:.::     ||:
Zfish   259 LIHHMNACSDSLRDVDGLFKKSVRRVHKLSEIKPASTLDLREDASENTTPSMGDRSKSVPGLNAD 323

  Fly   181 EGDEE---------------------------------------DKQSEQKLGRLNFKLEYDFNS 206
            :.:||                                       |....:..|.:.|.|.||..|
Zfish   324 DDEEEEDIDNLVNIHRQKFGSSMGSLGGSRTTLGSMMSVYSEAGDYDHVEVSGEIVFSLSYDEPS 388

  Fly   207 NSLAVTVIQAEELPALDMGGTS-DPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYAD 270
            .||:|.|.:.:.|...|..... :||||.||||||.|| :|.:....::|.|.||..: |:....
Zfish   389 QSLSVMVHECKGLAYADPAKKKCNPYVKAYLLPDKSKK-KTSIKHNNINPSFKETLKY-SISRTQ 451

  Fly   271 AMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKL--------G 327
            .|.:||..:::.:|||..:..:|||:|.:.:.|:....||   .:::.|:...:.|        |
Zfish   452 LMTRTLQLSVWHYDRFGHNAFLGEVEVLMDSYDIDSAHEE---CMALRGKAVPQSLLSPFDQYKG 513

  Fly   328 DICFSLRYV----PTA------GK---------LTVVILEAKNLKKMDVGGLSDPYVK-IAIMQN 372
            ::..||:||    |.|      ||         |.|:|.|||||..:..||..|.:|| ..:...
Zfish   514 ELVISLKYVTPNAPNAEDSKGKGKKSKPADGSELHVLIKEAKNLTALKAGGTCDSFVKGYLLPSK 578

  Fly   373 GKRLKKKKTSIKKCTLNPYYNESFSF-EVPFEQIQKICLVVTVVDYDRIGTSEPIG--RCILGCM 434
            .|...||||.:.|.|.:|.||.:|.: .:..::::.:||.:||.|.:.:.:::.:|  |..||.:
Zfish   579 SKSSSKKKTPVVKKTKSPNYNHTFVYNNLSLDELKDMCLELTVWDRETLSSNDFLGGVRLSLGAV 643

  Fly   435 ------------GTGTELRHWSDMLASP 450
                        .||.|:..|..|:..|
Zfish   644 TVKEGKEEWMADSTGEEILLWKKMMQYP 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 18/122 (15%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 43/124 (35%)
C2B_Synaptotagmin-1 326..461 CDD:176047 49/168 (29%)
sytl4NP_001074457.1 PHD_SF 10..124 CDD:473978
FYVE_Slp4 60..109 CDD:277303
C2A_SLP-4_5 375..496 CDD:175995 43/125 (34%)
C2B_SLP_1-2-3-4 512..682 CDD:175987 48/160 (30%)
Blue background indicates that the domain is not in the aligned region.

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