DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Syt10

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_061273.1 Gene:Syt10 / 54526 MGIID:1859546 Length:523 Species:Mus musculus


Alignment Length:475 Identity:171/475 - (36%)
Similarity:248/475 - (52%) Gaps:97/475 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNAKSETDAKPEAE----PAP-ASEPA-------ADLESVDQKLEETHHSKFREVDRQEQEVLAE 55
            |....||:.|.|.|    ||| |.|||       .|:.:..|...:.|..|...|.||..|..:.
Mouse   104 PTEVFETEEKKEVEENEKPAPKAIEPAIKISHTSPDIPAEVQTALKEHLIKHARVQRQTTEPTSS 168

  Fly    56 KAAEAASQRIAQ---VESTTRSATTEAQESTTTAVPVIKKIEHVGEVVTEVIAERTGLPTWGVVA 117
            ....:..:.:.:   |.|...|..||         |::::    ||..|.:..            
Mouse   169 SRHNSFRRHLPRQMNVSSVDFSVGTE---------PILQR----GETRTSIGR------------ 208

  Fly   118 IIILVFLVVFGIIFFCVRRFLKKRRTKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEELTENAEEG 182
                            ::..|.|:::.|.:|.:..|:|:                          
Mouse   209 ----------------IKPELYKQKSVDSEGNRKDDVKT-------------------------- 231

  Fly   183 DEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETK 247
                      .|:|||.|:||:.:..|.|.:|:|.:|||.|..||||||||:|||||:||||:|:
Mouse   232 ----------CGKLNFALQYDYENELLVVKIIKALDLPAKDFTGTSDPYVKIYLLPDRKKKFQTR 286

  Fly   248 VHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVP-LCTI-DLAQTIEE 310
            ||||||:|:|:|.|.| .:.|....|:.|.|:|:||||||:||.||||.:. |..: ||::....
Mouse   287 VHRKTLNPLFDELFQF-PVVYDQLSNRKLHFSIYDFDRFSRHDMIGEVILDNLFEVSDLSREATV 350

  Fly   311 WRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKR 375
            |:|:.....|  ...||:|.|||.|:||||::|:.:::.:|||.||:.|.||||||:::|..|:|
Mouse   351 WKDIHCATTE--SIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRR 413

  Fly   376 LKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTEL 440
            |||:||:.||.||||.|||:..|::|.|.:.::.|.:.|:||||:|.:|.||.|..|....|...
Mouse   414 LKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLCIAVMDYDRVGHNEVIGVCRTGLDAEGLGR 478

  Fly   441 RHWSDMLASPRRPIAQWHTL 460
            .||::|||..|:||..||.|
Mouse   479 DHWNEMLAYHRKPITHWHPL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 29/145 (20%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 66/125 (53%)
C2B_Synaptotagmin-1 326..461 CDD:176047 68/135 (50%)
Syt10NP_061273.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 13..35
C2A_Synaptotagmin-1-5-6-9-10 231..356 CDD:176031 66/161 (41%)
C2B_Synaptotagmin-3-5-6-9-10 365..498 CDD:176048 66/132 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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