DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt4

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001164985.1 Gene:syt4 / 447980 XenbaseID:XB-GENE-5963049 Length:424 Species:Xenopus tropicalis


Alignment Length:414 Identity:152/414 - (36%)
Similarity:209/414 - (50%) Gaps:74/414 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GVVAIIILVFLVVFGIIFFCVRRFLKKRRTK------------------DGKGKKGVDMK----- 155
            |:|:...|||.|.......|.|:..|...|.                  :.|.|.|.|.|     
 Frog    19 GLVSGFGLVFTVSLFSWICCQRKSAKSNTTPPYKFVHVLKGVDIYPESLNSKKKFGADEKTELAP 83

  Fly   156 -------SVQL----------LGSAYKEKVQPDMEELTENAEEGDEEDKQS-------------- 189
                   |:.|          ...|.|.:..||:|:.::  .:..|:||.|              
 Frog    84 KSLISKTSLHLDLEKRDLNGNFPKANKVRSSPDLEDFSQ--PQLPEKDKDSVSPESVKSNASVVS 146

  Fly   190 ---EQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALD-MGGTSDPYVKVYLLPDKKKKFETKVHR 250
               :.|||.|.|.|||:|...:..|.:.:|..|||:| ...|||||:|:.:||:||.|.:|:|.|
 Frog   147 LDKQDKLGTLFFALEYNFEKKAFVVNIKEARSLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLR 211

  Fly   251 KTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLV 315
            |||.|.|:|||||..:||:...:..|.|.|..|||||:.|.||||..||..|:|:    :.|.|:
 Frog   212 KTLDPAFDETFTFYGIPYSQVQDLVLHFIILSFDRFSRDDVIGEVSFPLSGIELS----DGRVLM 272

  Fly   316 -------SVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNG 373
                   :|....|:   |::..||.|..|...||||:|:|::|.|.:|.||||||||:.:....
 Frog   273 NREINKRNVRKSAGR---GELLISLCYQSTTNTLTVVVLKARHLPKAEVSGLSDPYVKVNLYHAK 334

  Fly   374 KRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGT 438
            ||:.||||.:||||.|..:||.|.|::|.|.::.|.:...|:|.||...:|.|||.|||....||
 Frog   335 KRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDISVEFLVMDSDRGSRNEVIGRLILGSSADGT 399

  Fly   439 ELRHWSDMLASPRRPIAQWHTLKD 462
            ...||.::...|||.||:||.|.|
 Frog   400 GGEHWKEICEHPRRQIAKWHMLCD 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 17/86 (20%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 60/131 (46%)
C2B_Synaptotagmin-1 326..461 CDD:176047 62/134 (46%)
syt4NP_001164985.1 C2A_Synaptotagmin-4-11 152..278 CDD:176034 60/129 (47%)
C2B_Synaptotagmin-4 287..422 CDD:176049 62/137 (45%)

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