DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and syt9b

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001003985.1 Gene:syt9b / 445476 ZFINID:ZDB-GENE-040822-6 Length:517 Species:Danio rerio


Alignment Length:461 Identity:169/461 - (36%)
Similarity:253/461 - (54%) Gaps:60/461 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNAKSETDAKPEAEPAPASEPAADLESVDQKLEETHHSKFREVDRQEQEVLAEKAAEAASQRIAQ 67
            |:.|   |.:.|.:|.     .|::|.::::..|..     |.|.....||.|.|        .:
Zfish    89 PSLK---DQQGEQQPV-----LAEVEGLEREYSEDF-----EKDPNAPLVLPESA--------MK 132

  Fly    68 VESTTRSATTEAQESTTTAVPVIKKIEHVGEV-VTEVIAERTGLPTWGVVAIIILVFLVVFGIIF 131
            :..|:.....|||...       |::.|:... |...:.|.|.......:...:.|....|.:..
Zfish   133 ISHTSPDIQLEAQTKA-------KELNHIHIARVQRQVTEPTSSVRHNSIRRQMNVSNPDFNMAQ 190

  Fly   132 FCVRRFLKKRRTKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRL 196
            |      :::.:..|.|           ||     :::|::.:    ....|.:|.:.....|||
Zfish   191 F------QRQESITGPG-----------LG-----RIKPELYK----QRSVDTDDGRRADSCGRL 229

  Fly   197 NFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETF 261
            :|.::||.:...|.|.:.:|::|||.|..||||||||:|||||:|.|.:||||||||:|:|:|.|
Zfish   230 HFIIKYDCDLEQLIVKIHRAQDLPAKDFTGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPIFDEVF 294

  Fly   262 TFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVP--LCTIDLAQTIEEWRDLVSVEGEGGQE 324
            .| .:.|.:...:.|.|:::||||||:||.||:|.|.  |...|..|.....||::.|..:  ..
Zfish   295 LF-PVAYGELPTRKLHFSVYDFDRFSRHDVIGQVVVDNFLDLPDFPQETRLCRDILYVSAD--NV 356

  Fly   325 KLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLN 389
            .|||:.|||.|:||||:||:.|::|:|||.||:.|.||||||:::|.:|:||||:|||.|:.|||
Zfish   357 DLGDLMFSLCYLPTAGRLTITIIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLN 421

  Fly   390 PYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPI 454
            |.|||:..|:||.|.|.:|.|::.|:||||:|.:|.||.|.:|.........||::||..||:||
Zfish   422 PVYNEAIVFDVPPENIDQISLLIAVMDYDRVGHNEVIGICHVGNRAPSLGRDHWNEMLTYPRKPI 486

  Fly   455 AQWHTL 460
            |:||.|
Zfish   487 ARWHQL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 25/131 (19%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 61/125 (49%)
C2B_Synaptotagmin-1 326..461 CDD:176047 74/135 (55%)
syt9bNP_001003985.1 C2 226..350 CDD:301316 61/124 (49%)
C2B_Synaptotagmin-3-5-6-9-10 359..492 CDD:176048 72/132 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.