DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Syt7

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster


Alignment Length:323 Identity:137/323 - (42%)
Similarity:204/323 - (63%) Gaps:22/323 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LLGSAYKEKVQPDMEELTENAEEGDEEDKQSE---------------QKLGRLNFKLEYDFNSNS 208
            |:|.:...:.:|.:.....|..:|..:|..::               :.:|:::|.|||||.:.:
  Fly    99 LIGGSGASQTKPQIISSVGNPGDGTTKDSANKSISMTDMYLDSTDPSENVGQIHFSLEYDFQNTT 163

  Fly   209 LAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMN 273
            |.:.|:|.:||||.|:.|||||||:|.||||||.:.|||:.|:||:|.:||||.|:..|.....:
  Fly   164 LILKVLQGKELPAKDLSGTSDPYVRVTLLPDKKHRLETKIKRRTLNPRWNETFYFEGFPIQKLQS 228

  Fly   274 KTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPT 338
            :.|...:||:||||:.|.||||.:|||.:|.|.....|:.|    ....::|.|::..||.|.|:
  Fly   229 RVLHLHVFDYDRFSRDDSIGEVFLPLCQVDFAGKQSFWKAL----KPPAKDKCGELLSSLCYHPS 289

  Fly   339 AGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFE 403
            ...||:.:::|:|||..|:.|.||||||:.:....||::|:||.|..|||||.:||||||.||:|
  Fly   290 NSILTLTLIKARNLKAKDINGKSDPYVKVWLQFGDKRVEKRKTPIFTCTLNPVFNESFSFNVPWE 354

  Fly   404 QIQKICLVVTVVDYDRIGTSEPIGRCIL-GCMGTG-TELRHWSDMLASPRRPIAQWHTLKDPE 464
            :|::..|.|.|:|:|.||.:|.|||.:| |..|:| :|.:||.||::.||:.:.|||.|| ||
  Fly   355 KIRECSLDVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMISKPRQTVVQWHRLK-PE 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 61/123 (50%)
C2B_Synaptotagmin-1 326..461 CDD:176047 65/136 (48%)
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 61/127 (48%)
C2B_Synaptotagmin-7 277..414 CDD:176050 65/136 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468156
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 1 1.000 - - mtm1065
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
76.950

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