DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and Syt4

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster


Alignment Length:413 Identity:139/413 - (33%)
Similarity:205/413 - (49%) Gaps:99/413 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 FLKKRRTKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQ---------- 191
            :|||..:..|.       |.:.||.....:...|..:...:.:||||...:.:||          
  Fly    74 YLKKSPSPTGG-------KQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVD 131

  Fly   192 -----------------------------------------------KLGRLNFKLEYDFNSNSL 209
                                                           |||.:.|||.|....|:|
  Fly   132 GNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNAL 196

  Fly   210 AVTVIQAEELPALDMGGTS-----------------DPYVKVYLLPDKKKKFETKVHRKTLSPVF 257
            .|::|:...||.  .||:|                 |||||:.|||||:.|.:|:|.|.|.:||:
  Fly   197 MVSIIRCRGLPC--KGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVY 259

  Fly   258 NETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGG 322
            :|.|||..|...|..|.:|.|.|..|||:|:.|.||||..||.:|::....:|   .:|:..|..
  Fly   260 DEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKE---ALSISKEIQ 321

  Fly   323 QEKL-------GDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKK 380
            ...|       |::..||.:.|.||:||||:|:|:||.:|||.||:||||||.::.||:|:.|||
  Fly   322 PRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKK 386

  Fly   381 TSIKKCTLNPYYNESFSFEVPFEQ-----IQKICLVVTVVDYDRIGTSEPIGRCIL-GCMGTGTE 439
            |.:||.||:|.:||||:|::|..:     ::.:.|.:.::|:||:..:|.|||..| |...:.|.
  Fly   387 THVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTA 451

  Fly   440 LRHWSDMLASPRRPIAQWHTLKD 462
            |.||:::..||||.||:||.|.:
  Fly   452 LNHWNEVCNSPRRQIAEWHKLNE 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 6/23 (26%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 56/140 (40%)
C2B_Synaptotagmin-1 326..461 CDD:176047 66/147 (45%)
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 58/147 (39%)
C2B_Synaptotagmin-4 332..473 CDD:176049 65/140 (46%)

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