DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt11a

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_998625.2 Gene:syt11a / 406769 ZFINID:ZDB-GENE-040426-2815 Length:451 Species:Danio rerio


Alignment Length:456 Identity:147/456 - (32%)
Similarity:218/456 - (47%) Gaps:107/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 IAERTGL-PTWGVVAII-------ILVFLVVFGIIFF--CVRRF--------------------- 137
            :||.|.| ||:.|..::       :||..|...:..:  |.||:                     
Zfish     1 MAEMTNLKPTYDVSPVLAGFLGAGVLVVSVTVAVFLWTCCQRRYRQMTGAYKLTSGPYDPPVDPP 65

  Fly   138 -------------------LKK-----RRTKD-------GKGKKGVDMKSVQL------------ 159
                               .||     ||:..       |:|.:..|:..|..            
Zfish    66 YKFIHMLKGISIYPETLSNSKKIVRVGRRSASNSLLREWGRGSRNGDVLLVDADPECGTTHLQMN 130

  Fly   160 -----LGSAYKEKVQP------DMEELTENAEEGDEEDKQ----SEQKLGRLNFKLEYDFNSNSL 209
                 :|....|:..|      .||..:.::.|...:...    :...||.|:..::|:|...:|
Zfish   131 HLVPPVGPPRLERALPIRADYCCMESSSGSSSEAHSKTASPYSLNSPSLGTLSLAIDYNFPKKAL 195

  Fly   210 AVTVIQAEELPALD-MGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMN 273
            .||:|.|:.|||:| ..|:||||||:.:||:||.:.:|:|.||||.|||:|||||..:||:....
Zfish   196 VVTIIGAQGLPAVDEQAGSSDPYVKMTILPEKKHRVKTRVLRKTLEPVFDETFTFYGVPYSSLPE 260

  Fly   274 KTLVFAIFDFDRFSKHDQIGEVKVPLCTID-------LAQTIEEWRDLVSVEGEGGQEKLGDICF 331
            .||.|.:..||||::.|.|||..|||..:|       :.|.|.:.....        |..|::..
Zfish   261 LTLHFLVLSFDRFARDDVIGEAVVPLEGVDPSTGRAHITQQISKRNTQC--------ESRGELLV 317

  Fly   332 SLRYVPTAGKLTVVILEAKNLKKMDVGGLS-DPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNES 395
            ||.|.|...:|.||:|:||:|..||:.||| :||||:.:....||:.||||.:|||||||.:|||
Zfish   318 SLSYHPVTHRLNVVVLKAKHLPTMDITGLSGNPYVKVNVFYGRKRIAKKKTHVKKCTLNPVFNES 382

  Fly   396 FSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMG-TGTELRHWSDMLASPRRPIAQWHT 459
            |.::||.|.:..|.:...|:|:||...:|.:||.:||... ..:.:.||.::..:|||.||:||.
Zfish   383 FIYDVPAELMPDISVEFLVIDFDRTTKNEVVGRLVLGGQSPIPSGVTHWREVCDNPRRQIAKWHN 447

  Fly   460 L 460
            |
Zfish   448 L 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 11/41 (27%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 58/131 (44%)
C2B_Synaptotagmin-1 326..461 CDD:176047 61/137 (45%)
syt11aNP_998625.2 C2 179..290 CDD:301316 55/110 (50%)
C2B_Synaptotagmin-4 312..449 CDD:176049 61/137 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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