DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Syt14

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_006497318.1 Gene:Syt14 / 329324 MGIID:2444490 Length:857 Species:Mus musculus


Alignment Length:514 Identity:110/514 - (21%)
Similarity:199/514 - (38%) Gaps:101/514 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EPAADLESVD-------QKLEETHHSKFREVDRQEQEVLAEKAAEAASQRIAQVESTTRSATTEA 79
            ||.:..||.|       :.|..||:|::..||.:::....|     ..|:.:.:.:.....:|||
Mouse   367 EPGSSSESEDEALGKYHEALSRTHNSRWPLVDSRQKSYAWE-----TRQKYSPLSAEYDGYSTEA 426

  Fly    80 QESTTTAVPVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTK 144
            .......:..:::...:.|:......:.:|.|.                  ..|....:...:.:
Mouse   427 SMEDGNCIQRMRRTPPLDELQPPPYQDDSGSPH------------------LSCTPSEIGDAKCE 473

  Fly   145 ---------------DGKGKKGVDMKSVQLLGSAYKEKVQPDMEEL---TENAEEGDEE------ 185
                           ..:|..|.:.:|....|  |::.|..|...:   .:.:.:|...      
Mouse   474 ISHCSNSPRCSFNKCPSEGSTGHEAESYHNKG--YEDDVPSDSTAVLSPEDMSAQGSSSQLPKPF 536

  Fly   186 DKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHR 250
            |.:.|.|.|.|:...:||.....|.|||....::|..:..|.:...|.:.|||.||::.:|.:.|
Mouse   537 DPEPEAKYGTLDVTFDYDSERQKLLVTVTAVTDIPTYNRTGGNSWQVHLVLLPIKKQRAKTSIQR 601

  Fly   251 KTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGE-------------VKVPL--- 299
            .. .|||.|||.|..:......|..:.|.::...|..|...:||             :.:|:   
Mouse   602 GP-CPVFTETFKFNHVESEMIGNYAVRFRLYGVHRMKKEKIVGEKIFYLTKLNLQGKMSLPVILE 665

  Fly   300 -------CTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMD- 356
                   |...::.:.....|..|.........:.:|...|.|..|.|:|:..:::..:.|.:. 
Mouse   666 PSYNPSGCDSQVSLSEASCGDSTSSCQSLQHGSVPEILIGLLYNATTGRLSAEVIKGSHFKNLAA 730

  Fly   357 --------------VGG----LSDPYVKIAIMQN-GKRLKKKKTSIKKCTLNPYYNESFSFEVPF 402
                          :||    :.|.|||:.::.: |:.:.|.|||.::...||.|.|:|.|:|..
Mouse   731 NRPPNGLFCCLKHLIGGQVYIIRDTYVKLTLLNSMGQEMSKCKTSTRRGQPNPVYKETFVFQVAL 795

  Fly   403 EQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTG-TELRHWSDMLASPRRPIAQWHTL 460
            .|:..:.|:::|.:...:...|.||...||...:| .|||||:.|..|..:.:.:||.|
Mouse   796 FQLSDVTLILSVYNRRSMKRKEMIGWISLGLNSSGEEELRHWTAMKESKGQQVCRWHAL 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 20/120 (17%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 35/146 (24%)
C2B_Synaptotagmin-1 326..461 CDD:176047 44/156 (28%)
Syt14XP_006497318.1 C2A_Synaptotagmin-14_16 543..666 CDD:176035 33/123 (27%)
C2B_Synaptotagmin-14_16 699..855 CDD:176053 44/156 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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