DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and PLA2G4D

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_828848.3 Gene:PLA2G4D / 283748 HGNCID:30038 Length:818 Species:Homo sapiens


Alignment Length:158 Identity:44/158 - (27%)
Similarity:74/158 - (46%) Gaps:24/158 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 LAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMN 273
            |.|.|::|..|...|:...:||||.:.|......||:||....|..||:||.|.|  |..:...|
Human    24 LTVRVLEARNLRWADLLSEADPYVILQLSTAPGMKFKTKTLTDTSHPVWNEAFRF--LIQSQVKN 86

  Fly   274 KTLVFAIFDFDRFSKHDQIGEVKVPLC---TIDLAQTI--EEWRDLVSVEGEGGQEKLGDICFSL 333
             .|..:|:|.|..::.|        :|   ..|:::.:  :..|...| :...|:|:| |:.|.:
Human    87 -VLELSIYDEDSVTEDD--------ICFKVLYDISEVLPGKLLRKTFS-QSPQGEEEL-DVEFLM 140

  Fly   334 RYVPTAGK----LTVVILEAKNLKKMDV 357
            .  .|:.:    :|..::.|:.|..:||
Human   141 E--ETSDRPENLITNKVIVARELSCLDV 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 32/111 (29%)
C2B_Synaptotagmin-1 326..461 CDD:176047 9/36 (25%)
PLA2G4DNP_828848.3 C2_cPLA2 23..141 CDD:176001 38/129 (29%)
cPLA2_Grp-IVB-IVD-IVE-IVF 269..811 CDD:132840
Substrate binding. /evidence=ECO:0000269|PubMed:27220631, ECO:0007744|PDB:5IXC, ECO:0007744|PDB:5IZR 330..331
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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