DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Syt2

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_036797.2 Gene:Syt2 / 24805 RGDID:3804 Length:422 Species:Rattus norvegicus


Alignment Length:441 Identity:249/441 - (56%)
Similarity:307/441 - (69%) Gaps:32/441 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 REVDRQEQEVLAEKAAEAASQRIAQV----ESTTRSATTEAQESTTTAVPVIKKIEHVGEVVTEV 103
            |.:.::.||.:...|...|:..:|..    .||..:.|.|:||.....:    |.:...|:    
  Rat     2 RNIFKRNQEPIVAPATTTATMPLAPAAPVDNSTESTGTGESQEDMFAKL----KDKFFNEI---- 58

  Fly   104 IAERTGLPTWGVVAIIILVFLVVFGIIF-FCVRRFLKKRRTKDGKGKKGVDMKSVQLLGSAYKEK 167
              .:..||.|.::|:.::..|::....| .|.:...||::.|..|||   .||:...:......:
  Rat    59 --NKIPLPPWALIAMAVVAGLLLLTCCFCICKKCCCKKKKNKKEKGK---GMKNAMNMKDMKGGQ 118

  Fly   168 VQPDMEE-LTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPY 231
            ...|.|. |||...||:||  :..:.||:|.|.|:|||.:|.|.|.|:||.||||||||||||||
  Rat   119 DDDDAETGLTEGEGEGEEE--KEPENLGKLQFSLDYDFQANQLTVGVLQAAELPALDMGGTSDPY 181

  Fly   232 VKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVK 296
            |||:||||||||:|||||||||:|.|||||||| :||.:...||||.||:|||||||||.|||||
  Rat   182 VKVFLLPDKKKKYETKVHRKTLNPAFNETFTFK-VPYQELGGKTLVMAIYDFDRFSKHDIIGEVK 245

  Fly   297 VPLCTIDLAQTIEEWRDLVSVEGEGGQ----EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDV 357
            ||:.|:||.|.|||||||     :||:    |||||||.|||||||||||||.||||||||||||
  Rat   246 VPMNTVDLGQPIEEWRDL-----QGGEKEEPEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMDV 305

  Fly   358 GGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGT 422
            ||||||||||.:||||||||||||::||.|||||:|||||||:|||||||:.:||||:|||::|.
  Rat   306 GGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQKVQVVVTVLDYDKLGK 370

  Fly   423 SEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPEETDEIL-KN 472
            :|.||:..:|...|||||||||||||:|||||||||:||..||.|.:| ||
  Rat   371 NEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPEEEVDALLGKN 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 24/103 (23%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 92/123 (75%)
C2B_Synaptotagmin-1 326..461 CDD:176047 107/134 (80%)
Syt2NP_036797.2 Syt2_N 4..116 CDD:409249 28/124 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..43 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..141 13/43 (30%)
Phospholipid binding. /evidence=ECO:0000305 136..382 183/253 (72%)
C2A_Synaptotagmin-1-5-6-9-10 142..264 CDD:176031 92/127 (72%)
C2B_Synaptotagmin-1 274..409 CDD:176047 107/134 (80%)

Return to query results.
Submit another query.