DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Sytl5

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_808372.1 Gene:Sytl5 / 236643 MGIID:2668451 Length:753 Species:Mus musculus


Alignment Length:600 Identity:126/600 - (21%)
Similarity:214/600 - (35%) Gaps:174/600 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ETDAKPEAEPAPASEPAADLESVDQKLEETHH---------SKFREVDRQEQEVLAEKAAEAAS- 62
            ||..:.:|:  ...:.:..|.||.||  .||.         ||||...|.|......::..:.| 
Mouse   152 ETQNQEQAQ--QCVDKSDTLSSVRQK--TTHDGPKKKGFLLSKFRSATRGEIRTPKPESGRSYSL 212

  Fly    63 -------QRIAQVESTTRSATT-------EAQESTTTA------VPVIKK--------------- 92
                   |.......:.|.:||       ||...|:.:      :||.::               
Mouse   213 DLDSQNLQSFKSASGSDRGSTTSSDLIDQEAGRRTSKSSYSNGGIPVTQRSPVPSAHSVTSINSR 277

  Fly    93 ------------IEHVGEVVTEVIAERT-GLPTWGVVAIIILVFLVVFGIIFFCVR--------- 135
                        ||:..|.:|:.....| |.|:           :.|.|......|         
Mouse   278 EHGFENSMALATIENTCEELTKSHRRNTSGTPS-----------IAVSGTSLSSERSRSEVDLSE 331

  Fly   136 ------RFLKKRRTKDGKGKKGVDMKS-------VQLLGSAYKEKVQPDMEELTENAEEGDEE-- 185
                  ......|::...|....|:.|       |.|:.|.:..........|:.|::.|.:.  
Mouse   332 SFAEDLEDTSSIRSRSVPGALDKDLNSLEDTEDGVDLVSSRFSANTHSLASGLSTNSQAGSDRKR 396

  Fly   186 ------DKQSE--------------------QKLGRLNFKLEYDFNSNSLAVTVIQAEELPALD- 223
                  |..|:                    :..|.:...:.|.:.:..|.:.|.....|...| 
Mouse   397 SYLNVPDADSDTTSLNSMMSVYSETGDYGNVKVTGEILLHISYCYKTGGLYIFVKSCRNLATGDE 461

  Fly   224 MGGTSDPYVKVYLLPDKKK--KFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRF 286
            ....:|.|||.||||||.:  |.:||:...| :|.||||..: ::.:.....:||..:::.:|||
Mouse   462 KKQRTDAYVKSYLLPDKSRNNKRKTKIRTGT-NPEFNETLKY-TISHTQLETRTLQLSVWHYDRF 524

  Fly   287 SKHDQIGEVKVPLCTIDLAQTIEEW---RDLVSVEGEGGQEKLGDICFSLRYVP----------- 337
            .::..:|||::...:.:.....:||   :..|.:..:...:..|::...|||:|           
Mouse   525 GRNSFLGEVEIAFDSWNFENPCDEWFVLQPKVELAPDISLQYKGELTIVLRYIPPEENLIFPAGQ 589

  Fly   338 ------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIK 384
                              :.|.|.|.|.:||||..:..||.||.:||..::.:..:..|.||::.
Mouse   590 RQEKKIFKRGKKKESSSISGGILEVFIKKAKNLTAVKSGGTSDSFVKGYLLPDDNKATKHKTAVV 654

  Fly   385 KCTLNPYYNESFSFEVPFEQ-IQKICLVVTVVDYDRI-------------GTSEPIGRCILGCMG 435
            |.::||.:|.:|.|...:.| |:..||.:|:.|.:..             |:....|:.:.....
Mouse   655 KKSVNPEWNHTFIFSGLYPQDIKNACLELTIWDKEAFSSNVFLGGVRLNSGSGMSYGKTVDWMDS 719

  Fly   436 TGTELRHWSDMLASP 450
            .|.|.|.|..|..:|
Mouse   720 HGEEQRLWQKMADNP 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 36/200 (18%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 35/129 (27%)
C2B_Synaptotagmin-1 326..461 CDD:176047 41/167 (25%)
Sytl5NP_808372.1 PHD_SF 11..123 CDD:419867
FYVE_Slp5 62..108 CDD:277305
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..279 26/130 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..359 10/72 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..404 3/23 (13%)
C2A_SLP-4_5 430..553 CDD:175995 35/124 (28%)
C2B_SLP_1-2-3-4 567..745 CDD:175987 41/167 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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