DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and Syt3

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_057872.3 Gene:Syt3 / 20981 MGIID:99665 Length:587 Species:Mus musculus


Alignment Length:329 Identity:150/329 - (45%)
Similarity:214/329 - (65%) Gaps:23/329 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 KSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEEL 219
            :..:|:|     :::|::.:.|...........::....||::|.|.|.:.|:.|.|.::||.:|
Mouse   264 EKAKLIG-----QIKPELYQGTGPGGRRGGGSGEAGAPCGRISFALRYLYGSDQLVVRILQALDL 323

  Fly   220 PALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFD 284
            ||.|..|.||||||:|||||:||||:||||||||:|:|||||.| |:|.|:...:.|.|:::|||
Mouse   324 PAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQF-SVPLAELAQRKLHFSVYDFD 387

  Fly   285 RFSKHDQIGEVKVPLCTIDLAQTIEE------WRDLVSVEGEGGQEK--LGDICFSLRYVPTAGK 341
            |||:||.||:|.:.    :|.:..|:      |||::    |||.||  ||::.|||.|:||||:
Mouse   388 RFSRHDLIGQVVLD----NLLELAEQPPDRPLWRDIL----EGGSEKADLGELNFSLCYLPTAGR 444

  Fly   342 LTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQ 406
            |||.|::|.|||.||:.|.||||||.:::..|:||||:||||||.||||.|||:..|:|..|.::
Mouse   445 LTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVE 509

  Fly   407 KICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELR-HWSDMLASPRRPIAQWHTLKDPEETDEIL 470
            .:.|.:.|||||.||.:|.||.|.:|........| ||::|||:||:|:..||.|.:.:......
Mouse   510 NVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEEKTLSSFT 574

  Fly   471 KNMK 474
            |..|
Mouse   575 KGGK 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 1/5 (20%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 66/129 (51%)
C2B_Synaptotagmin-1 326..461 CDD:176047 72/135 (53%)
Syt3NP_057872.3 Cysteine motif. /evidence=ECO:0000269|PubMed:10531343 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..258
C2A_Synaptotagmin-1-5-6-9-10 297..421 CDD:176031 66/132 (50%)
C2B_Synaptotagmin-3-5-6-9-10 430..564 CDD:176048 71/133 (53%)
Blue background indicates that the domain is not in the aligned region.

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