DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and snt-7

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_510526.2 Gene:snt-7 / 181615 WormBaseID:WBGene00011682 Length:416 Species:Caenorhabditis elegans


Alignment Length:349 Identity:85/349 - (24%)
Similarity:160/349 - (45%) Gaps:60/349 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 KGVDMKSVQLLGSAYKEKVQPDMEELTENAEE--------GDEE--DKQSEQKLGRLNFKLEYDF 204
            || |:.|:.::..| |:..:.....|.:|..:        |||.  ...:...:|.:...:.:|.
 Worm    93 KG-DLTSLFMIPKA-KKGARSMFSNLHQNQFDRGLYQFPTGDESACSSVTMSAVGSIQLSVSHDV 155

  Fly   205 NSNSLAVTVIQAEELPALDMGGTSDPYVKVYL-LPDKKK---KFETKVHRKTLSPVFNETFTFKS 265
            |.|.|.||:::|.:||........:|::||.| :||.||   ..:||.:..|.||:.||.|.| |
 Worm   156 NLNLLTVTIVKAVDLPTKREDDLPNPFMKVSLEIPDSKKPNVDHQTKTYNGTASPLINEDFYF-S 219

  Fly   266 LPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEE---------WRDLVSVEGEG 321
            :.........|...::|:|:||..:.:|     .|.:.|.:..|.         |.:::..| :|
 Worm   220 VTSQQVSICRLEVMVYDYDQFSVDECVG-----YCWLTLGRINEHFEHDLPTLFWAEVLPYE-DG 278

  Fly   322 GQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQ-NGKRLKKKKTSIKK 385
            ..:..|.:.|:|.|:..|.:||:.|.:.:|::..:.|.::   :::.::. ..|.|||||||:||
 Worm   279 ENKGYGQVLFALSYLSHAQRLTMNIFKVRNVRFRNGGNVA---LRVTLLDGEEKPLKKKKTSLKK 340

  Fly   386 CTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGT-----------SEPIGRCILGCMGTGTE 439
            ...:..:||..:|.:|...:.::.:.|.::  ...||           ..|:.:|        .:
 Worm   341 AARSVQFNECLTFSIPKHTLCEVFITVELI--TETGTFGIASRTLSRMQLPLHKC--------KD 395

  Fly   440 LRHWSDMLASPRRPIAQWHTLKDP 463
            |  |..::...:.. |:|:..:.|
 Worm   396 L--WRAIIREEKSQ-ARWYPFEQP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 38/136 (28%)
C2B_Synaptotagmin-1 326..461 CDD:176047 33/146 (23%)
snt-7NP_510526.2 C2 145..257 CDD:387358 36/117 (31%)
C2 283..>374 CDD:387358 25/95 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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