DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and Sytl4

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_536335.2 Gene:Sytl4 / 140594 RGDID:620204 Length:672 Species:Rattus norvegicus


Alignment Length:521 Identity:129/521 - (24%)
Similarity:224/521 - (42%) Gaps:96/521 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EPAAD-LESVDQK-LEETHHS------KFREVDRQEQEVLAEKAAEAASQRIAQVESTTRSATTE 78
            :||.: .|:|.|. |::|...      :..:..::||.||.|.....:.:...:.||.:..:.|.
  Rat   143 KPAVNKRETVGQSLLQQTQMGDIWPGRRIIQEQQKEQSVLFEVPKLKSGKSALEAESESLDSYTA 207

  Fly    79 AQESTTT--------AVPVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVR 135
            ..:||:.        ..|..||:......|.:.||........|....:|.             :
  Rat   208 DSDSTSRRDSLDKSGLFPEWKKMSAPKSQVEKEIAPGNQNAVCGDEGDMIF-------------K 259

  Fly   136 RFLKKRRTKDGKGKKGVDMKSVQ------LLGSAYKE--KVQPDMEELTENAEEGDEEDKQSEQK 192
            :..:|........|..:|::...      :||...|.  .:..||||..|..|:.|...|...||
  Rat   260 KNTRKVLRPSEYTKSVIDLRPEDVAQESGILGDRSKSVPGLSVDMEEEEEEEEDIDHLVKLHRQK 324

  Fly   193 L---------------------------------GRLNFKLEYDFNSNSLAVTVIQAEELPALDM 224
            |                                 |::.|.|:::..:.:|.:.|.:..:|...|.
  Rat   325 LARGSMQSGSSMSTIGSMMSLYSEAGDFGNVSVTGKIAFSLKFEQKTQTLVIHVKECHQLAYADE 389

  Fly   225 G-GTSDPYVKVYLLPDKKK--KFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRF 286
            . ..|:||||.||||||.:  |.:|.:.|.|::|:::|||.:: :..:....:||.|:::...||
  Rat   390 AKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTINPLYDETFRYE-ISESLLAQRTLQFSVWHHGRF 453

  Fly   287 SKHDQIGEVKVPLCTIDLAQTIEEWRDL---VSVEGEGG-QEKLGDICFSLRYVPTA-------- 339
            .::..:||.:|.:.:..|.:.::....|   :|.|...| ....|::..||:|:|.:        
  Rat   454 GRNTFLGEAEVHMDSWKLDKKLDHCLPLHGKISTESSPGLPAHKGELVVSLKYIPASKLPVGGDR 518

  Fly   340 --------GKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESF 396
                    |:|.|.|.|||||.....||.||.:||..::....:..|:||.:.|.||||:||.:|
  Rat   519 KKSKGGEGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPMRNKASKRKTPVMKKTLNPHYNHTF 583

  Fly   397 SFE-VPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTL 460
            .:. |..|.:|.:||.:||.|.:.:.:::.:|...|| :|||.......|.:.|....::.|..:
  Rat   584 VYNGVRLEDLQHMCLELTVWDREPLASNDFLGGVRLG-VGTGISSGEVVDWMDSTGEEVSLWQKM 647

  Fly   461 K 461
            :
  Rat   648 R 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 16/112 (14%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 38/162 (23%)
C2B_Synaptotagmin-1 326..461 CDD:176047 48/151 (32%)
Sytl4NP_536335.2 PHD_SF 8..121 CDD:473978
FYVE_Slp4 58..107 CDD:277303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..222 4/22 (18%)
C2A_SLP-4_5 358..482 CDD:175995 35/124 (28%)
C2B_SLP_1-2-3-4 497..662 CDD:175987 48/153 (31%)
Blue background indicates that the domain is not in the aligned region.

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