DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt8

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001352218.1 Gene:syt8 / 103909874 ZFINID:ZDB-GENE-060303-4 Length:397 Species:Danio rerio


Alignment Length:396 Identity:190/396 - (47%)
Similarity:263/396 - (66%) Gaps:24/396 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 TTEAQESTTTAVPVIKKIEHVGEVVTEVIAERTGLPTWGVVAII-ILVFLVVFGIIFFCVRRFLK 139
            |.....:||||.|        |.:.:  :.:|..||.|.:.||. .:|.|::..:|..||:...|
Zfish    10 TKTPHTNTTTAAP--------GFLPS--LLDRIPLPRWAIYAIFAAIVLLILICVICCCVKCCCK 64

  Fly   140 KRRTKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDF 204
            .::.:..|..:.::||.:.  |:.....|||:.|         |.|...|:|:.|:|.:.||::.
Zfish    65 GKKKRKKKPDEKINMKGIS--GTTTTALVQPETE---------DTEYSSSDQQRGKLQYSLEFNA 118

  Fly   205 NSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYA 269
            :.:.|.|.:.:|..|.|:|.|||||||||||:||:|.|.|||||.||||:|||||.|.:: :|..
Zfish   119 SRSELTVGIKEAAALKAMDSGGTSDPYVKVYILPNKSKTFETKVFRKTLNPVFNENFKYQ-IPQK 182

  Fly   270 DAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLR 334
            :....|||..::||:||||||.|||:::.|.|:|....||||||| |...:..||.||:||||||
Zfish   183 ELTESTLVMQVYDFNRFSKHDIIGEIRLNLSTVDWNHVIEEWRDL-SEASKHEQEHLGEICFSLR 246

  Fly   335 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFE 399
            ||||:.||||:|||||||||||..|.||||||:.::...|:.||||||:||.|||||:||||:|:
Zfish   247 YVPTSSKLTVIILEAKNLKKMDQVGSSDPYVKVQLILEKKKWKKKKTSVKKRTLNPYFNESFTFD 311

  Fly   400 VPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPE 464
            |.||||||:.||::|.|:|::..::.||:..|||..||.:||||:|||::||:|:||||||...|
Zfish   312 VSFEQIQKVQLVISVWDHDKMSRNDAIGKIYLGCDATGNQLRHWADMLSNPRKPVAQWHTLLSAE 376

  Fly   465 ETDEIL 470
            :.|..|
Zfish   377 QVDTTL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 18/60 (30%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 65/123 (53%)
C2B_Synaptotagmin-1 326..461 CDD:176047 87/134 (65%)
syt8NP_001352218.1 C2A_Synaptotagmin-1-5-6-9-10 106..229 CDD:176031 65/124 (52%)
C2B_Synaptotagmin-1 238..372 CDD:176047 86/133 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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