DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and sytl3

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_021324208.1 Gene:sytl3 / 101882017 ZFINID:ZDB-GENE-040724-150 Length:581 Species:Danio rerio


Alignment Length:449 Identity:93/449 - (20%)
Similarity:166/449 - (36%) Gaps:93/449 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ETHHSKFREVDRQEQEVLAEKAAEAASQR---IAQVESTT---------------RSATTEAQES 82
            |....||..| ::..|...:|..: :.||   ||.|..|.               :...|::.|:
Zfish   134 EQQAKKFPSV-KENSETTGDKMLQ-SYQRLSFIAVVPPTPPPFYNPPSFNRLEEHKKPFTKSMEN 196

  Fly    83 TTTAVPV-IKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKDG 146
            ...:|.. |||:......::||..:.|                |..|.:.:..|:.|     .||
Zfish   197 LVASVSAHIKKLSKSQNDLSEVAGQLT----------------VDHGHMMYSRRKSL-----SDG 240

  Fly   147 KGKKGV-DMKSVQLLGSAYKEKVQ----PDMEELTENAEEGDEEDKQSEQKL------------G 194
            ...:.: .:.|:.:|.:|......    .|.:..:.:|...|:.|..|...:            |
Zfish   241 AINRALCKVPSLPILSTAQSTSTSTLCLTDDDVSSTSAYSDDQRDSNSSTGMDSVLFENTISVTG 305

  Fly   195 RLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVH-RKTLSPVFN 258
            .:...|.|:..::.|.:|:.....|...|......|||.|.|||.|...|:.|.. ||..:||:|
Zfish   306 EIEVVLAYNNRTSCLEITIKACRNLMFRDTKKKCHPYVNVCLLPKKCHNFKMKTAVRKGKNPVYN 370

  Fly   259 ETFTFKSLPYADAMNK-TLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGG 322
            ||||  .:..||.::. .|..:::......:...:||..:.|..:||..| :..|.|........
Zfish   371 ETFT--CVLSADLLSSAVLQLSVWHSRGLKRRLFLGETLIRLADMDLEDT-DSQRSLCCKLNPKA 432

  Fly   323 QEKLGD-----------ICFSLRYVP------------TAGKLTVVILEAKNLKKMDVGGLSDPY 364
            .:..||           |......:|            ..|:|||:..:...|..:   ..:..:
Zfish   433 PQLGGDAELQFTSVLLLIQAQFHTLPHNNTQTHGVLLGAPGQLTVLFTDVSKLLSV---SKTAHF 494

  Fly   365 VKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTS 423
            ..|..:...:.|.:|.:::||  .:.....||| .:..:::|:..|.:.:.:.:.:.||
Zfish   495 EGILCLPGHRELVRKTSALKK--TDGSIRMSFS-SLSQQELQQATLTLNLWEKNCLLTS 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 23/118 (19%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 37/137 (27%)
C2B_Synaptotagmin-1 326..461 CDD:176047 21/121 (17%)
sytl3XP_021324208.1 PHD_SF 27..134 CDD:328929 93/449 (21%)
FYVE_like_SF 73..120 CDD:333710
C2 304..429 CDD:326325 37/127 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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