DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and doc2a

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_031748920.1 Gene:doc2a / 101730387 XenbaseID:XB-GENE-922476 Length:391 Species:Xenopus tropicalis


Alignment Length:339 Identity:105/339 - (30%)
Similarity:158/339 - (46%) Gaps:52/339 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYV 232
            :.|...|..:::.:.|..|......||.|.|.|.||.....|...:::|:.|..:|..|.:||||
 Frog    61 IPPCGAETADDSADVDNYDSDESTALGTLEFDLLYDPEQCILQCCILRAKGLKPMDFNGLADPYV 125

  Fly   233 KVYLLPD--KKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEV 295
            |::|||.  |..|.:|:..|.:|:|.:||:.|:..:...|...|.|..::.|.|:.|.::.|||.
 Frog   126 KIHLLPGACKANKLKTRTVRNSLNPTWNESLTYCGITQEDMGKKILRISVCDEDKLSHNEFIGET 190

  Fly   296 KVPL-----------------------------------CTIDLAQTIEEWRDLVSVEGEGGQEK 325
            :|||                                   |.:...:..:||.          .|:
 Frog   191 RVPLRRLKPGERKHFNLCLERQIPLASPSSMTAALRGISCYLKELERCQEWE----------LEE 245

  Fly   326 LGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNP 390
            .|.|..||.|....|.|.|.|:...:|..|||.|.||||||..:..:.::..|.||.:||.||||
 Frog   246 RGRILLSLTYSSERGGLVVGIMRCAHLAAMDVNGFSDPYVKTYLKPDVEKKSKHKTVVKKKTLNP 310

  Fly   391 YYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIA 455
            .:||.|.:.:...::||..|.|||.|||...:::.||....|....|..|:||.:.|::|.:...
 Frog   311 EFNEEFFYNISQLELQKRSLEVTVWDYDLGKSNDFIGGVTFGMSSKGECLKHWMECLSTPNKRTE 375

  Fly   456 QWHTLKDPEETDEI 469
            .||||     |:|:
 Frog   376 HWHTL-----TNEL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 44/160 (28%)
C2B_Synaptotagmin-1 326..461 CDD:176047 53/134 (40%)
doc2aXP_031748920.1 C2A_Rabphilin_Doc2 86..209 CDD:176000 41/122 (34%)
C2 248..380 CDD:472691 51/131 (39%)
Blue background indicates that the domain is not in the aligned region.

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