DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt15

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_002941809.1 Gene:syt15 / 100496499 XenbaseID:XB-GENE-6050096 Length:420 Species:Xenopus tropicalis


Alignment Length:427 Identity:124/427 - (29%)
Similarity:201/427 - (47%) Gaps:77/427 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 VTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRF----------------------LKKRR 142
            ::|.:|...|    ||:.::.::.|:..| ::...:||                      :.|..
 Frog     1 MSEEVAAVAG----GVIGVVAILLLIGIG-VYILRKRFCFSSQYEEFFNQVPPTHTEVIAVDKDS 60

  Fly   143 TKDGKGKKGVDMKSVQL-----------LGSAYKEKVQPDMEELT-------------------- 176
            ...|...|...||.|..           :|....|::|.|.|..|                    
 Frog    61 MSLGTHNKDAVMKHVPFIVPPKFRGRDWIGLGNGERIQDDSEPYTAPDFLPRSSFCSLGGAYVVG 125

  Fly   177 -------ENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTS-DPYVK 233
                   :..||.:|.| ..|..:||:.|.:||:..:..|.|::::...   |..|..| :|:||
 Frog   126 SINPALYKFPEENEETD-FPEGNIGRIWFAVEYELETERLVVSLMKVRN---LQFGSDSCNPFVK 186

  Fly   234 VYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVP 298
            ::||||:::..::|..|||::|.|:|||.|: :.......:||.|:|:..|:..||..:|:|..|
 Frog   187 IHLLPDERRHLQSKTKRKTVNPQFDETFVFQ-VSGKTVHQRTLRFSIYHVDKIKKHHLLGQVVFP 250

  Fly   299 LCTIDLA--QTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGG-L 360
            |....|.  :.:..|||| .:|......:.|:|.|||.|....|:||||:|.||.|:.::..| :
 Frog   251 LKNESLTDDENVVIWRDL-ELENLEPPSEYGNIQFSLSYNDYLGRLTVVLLRAKGLQFLEERGVI 314

  Fly   361 SDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEP 425
            |..:||::.|.:.|.:|.|||:....|.||.|||:|||:|....:....|.:.|....:...|..
 Frog   315 SSAFVKVSFMNHNKLVKCKKTAAICGTANPVYNETFSFKVEHIGLDTASLSLAVYQNAQGEKSHL 379

  Fly   426 IGRCILG-CMGT-GTELRHWSDMLASPRRPIAQWHTL 460
            :||.::| .|.| |.||.||::||..|:..:.:||.|
 Frog   380 LGRVVVGPYMYTRGRELEHWNEMLNKPKDLVKRWHAL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 15/93 (16%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 43/126 (34%)
C2B_Synaptotagmin-1 326..461 CDD:176047 54/138 (39%)
syt15XP_002941809.1 TM_EGFR-like 7..32 CDD:213052 5/29 (17%)
C2A_Synaptotagmin-15-17 149..269 CDD:176036 43/124 (35%)
C2B_Synaptotagmin-15 279..417 CDD:176054 54/138 (39%)

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