DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and sytl5

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_012813070.1 Gene:sytl5 / 100496000 XenbaseID:XB-GENE-982310 Length:814 Species:Xenopus tropicalis


Alignment Length:539 Identity:116/539 - (21%)
Similarity:204/539 - (37%) Gaps:123/539 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPNAKSETDAKPEAEPAPASEPAADLESVDQKLEETHHSKFREVDRQEQEV------LAEKAAE 59
            |...|..:.|.:.|:.|..:......::|:|..:.............|...:      .|.:::.
 Frog   265 MISQASFKVDVRSESRPGSSLSARGSVDSLDTGVSSPKSKGNAPSSYQSSSINVIGTLPARQSSP 329

  Fly    60 AASQRIAQVESTTRSATTEAQESTTTAVPVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFL 124
            .||...|...|.:||......: |::::|......|          ||....|..:|        
 Frog   330 TASMHSAASNSHSRSGVQNGTK-TSSSIPEDMSKGH----------ERRASATPSLV-------- 375

  Fly   125 VVFGIIFFCVRRFLKKRRTKD---------GKGKKGVDMKSVQL-----LGSAYKEKVQPDMEEL 175
                    ..|..|...::|.         .:.::.:.|:|:.:     ....|.:|:..|.::|
 Frog   376 --------ISRASLSSEQSKSEYDLSGHFTEENQESISMRSISVPDYLNKDPEYIDKIDEDFDDL 432

  Fly   176 --TENAEEGDEEDKQSEQKLGRLN---------------------------------FKLEYDFN 205
              :.|..:.......|::|...||                                 ..:.|.:.
 Frog   433 GPSTNLTKSMNAHTLSDRKWTHLNVPDADADTRSLTSISLYSETGDYGNLRITGEILLNINYSYK 497

  Fly   206 SNSLAVTVIQAEELPALD-MGGTSDPYVKVYLLPDKKK--KFETKVHRKTLSPVFNETFTFKSLP 267
            :.:|.|.|.....|...| ....:|||||.||||||.:  |.:||:...|..|.||||..: .:.
 Frog   498 TGALNVVVKNCRNLAVADEKKNRTDPYVKAYLLPDKSRQSKRKTKIKTNTTDPDFNETLKY-VIS 561

  Fly   268 YADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDL---VSVEGEGGQEKLGDI 329
            :.....:||...::..|||.::..:|||.:||.:.:.....:|...|   :.:..:...:..|:|
 Frog   562 HTQLETRTLQLTVWHNDRFGRNSFLGEVDIPLDSCNFENQEDECFQLQPKMDLASDVTLQYKGEI 626

  Fly   330 CFSLRY-----------------------------VPTAGKLTVVILEAKNLKKMDVGGLSDPYV 365
            ...|||                             ||:.|.:.|:|..||||..|..||.||.:|
 Frog   627 TVGLRYITPEKNLTLPLDKVAEKKSFRKSKKANVKVPSGGLVEVLIKNAKNLTAMKSGGSSDTFV 691

  Fly   366 KIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSF-EVPFEQIQKICLVVTVVDYDRIGTSEPIGRC 429
            |..::.:..:..|.||.:.|.|:||.:|.:|:| .:....:..:|:.:||...:.:.::..:|..
 Frog   692 KGYLLPDNNKSTKHKTPVVKKTVNPEWNHTFTFASLQTSDLSNVCVELTVWGKESLTSNVFLGGV 756

  Fly   430 ILGCMGTGT---ELRHWSD 445
            .||| |:|.   ::..|.|
 Frog   757 CLGC-GSGVSYGDIVDWMD 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 17/112 (15%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 41/162 (25%)
C2B_Synaptotagmin-1 326..461 CDD:176047 42/153 (27%)
sytl5XP_012813070.1 PHD_SF 11..123 CDD:473978
FYVE_Slp5 65..111 CDD:277305
C2A_SLP-4_5 485..609 CDD:175995 37/124 (30%)
C2B_SLP_1-2-3-4 623..801 CDD:175987 42/153 (27%)
Blue background indicates that the domain is not in the aligned region.

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