DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and LOC100493529

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_002932169.1 Gene:LOC100493529 / 100493529 -ID:- Length:428 Species:Xenopus tropicalis


Alignment Length:430 Identity:244/430 - (56%)
Similarity:303/430 - (70%) Gaps:19/430 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KAAEAASQRIAQVESTTRSATTEAQESTTTA------VPVIKKIEHVGEVVTEVIAERTGLPTWG 114
            |.|||.......:.::|.........||..|      ....:||:.  |::.::  .:..||.|.
 Frog     7 KKAEAPPPETHTMPTSTEPPVVSQDNSTAVAGSGDKSADTFRKIQQ--ELMNQI--NKIPLPPWA 67

  Fly   115 VVAIIILVFLVVFGIIF-FCVRRFLKKRRTKDGKG---KKGVDMKSVQLLGSAYKEKVQPDMEE- 174
            ::||.::..|::....| .|.:...||::.|..||   |..::||.::..|....:....|.|. 
 Frog    68 LIAIAVVAGLLIITCCFCICKKCCCKKKKGKKEKGKGMKNALNMKDMKGSGGQNAKDDDDDAETG 132

  Fly   175 LTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPD 239
            |||.  |..||:::.|:|||:|.|.|:|||.:|.:.|.:|||.|||||||||||||||||:.|||
 Frog   133 LTEG--EDKEEEEKEEEKLGKLQFSLDYDFQNNQMQVGIIQATELPALDMGGTSDPYVKVFFLPD 195

  Fly   240 KKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDL 304
            ||||.|||||||||:|:|||||||| :||.:...|||..:|:|||||||||.|||||||:.|:||
 Frog   196 KKKKHETKVHRKTLNPIFNETFTFK-IPYQELGGKTLCMSIYDFDRFSKHDIIGEVKVPMNTVDL 259

  Fly   305 AQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAI 369
            .|.|||||||.|.|.| ..|||||||.|||||||||||||.||||||||||||||||||||||.:
 Frog   260 GQPIEEWRDLQSAEKE-EPEKLGDICISLRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHL 323

  Fly   370 MQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCM 434
            ||||||||||||::||.|||||:|||||||:|||||||:.:|:||:|||::|.:|.||:..:||.
 Frog   324 MQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQKVQVVITVLDYDKLGKNEAIGKIFVGCN 388

  Fly   435 GTGTELRHWSDMLASPRRPIAQWHTLKDPEETDEILKNMK 474
            .:||||||||||||:|||||||||.||..||.|..|.:.|
 Frog   389 ASGTELRHWSDMLANPRRPIAQWHPLKPEEEVDIALGSKK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 19/86 (22%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 89/123 (72%)
C2B_Synaptotagmin-1 326..461 CDD:176047 106/134 (79%)
LOC100493529XP_002932169.1 C2A_Synaptotagmin-1-5-6-9-10 153..271 CDD:176031 85/118 (72%)
C2B_Synaptotagmin-1 280..415 CDD:176047 106/134 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3492
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 470 1.000 Inparanoid score I1481
OMA 1 1.010 - - QHG48342
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 1 1.000 - - otm48349
Panther 1 1.100 - - LDO PTHR10024
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4219
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.110

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