DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt7b

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001232886.1 Gene:syt7b / 100334336 ZFINID:ZDB-GENE-090601-6 Length:488 Species:Danio rerio


Alignment Length:332 Identity:144/332 - (43%)
Similarity:202/332 - (60%) Gaps:17/332 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KRRTKDGKGKKG---------VDMKSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGR 195
            ||..|.|...||         .|..|..   |.....|..||..|:..:||.:.|....| ||||
Zfish   163 KRSNKPGSSPKGQTPDESHRRTDANSSV---SDLANSVTSDMLMLSPGSEEEEHEGPVCE-KLGR 223

  Fly   196 LNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNET 260
            :.|.:.|.|..::|.|.:::.::|||.|..|||||:||:|||||||.|.||||.||.|:|.:|||
Zfish   224 IQFSVGYSFQDSTLTVKILKGQDLPAKDFSGTSDPFVKLYLLPDKKHKLETKVKRKNLNPHWNET 288

  Fly   261 FTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSV-EGEGGQE 324
            |.|:..||...:.:||...:.|:||||::|.||||.:||..::|......|::|... :|.|.: 
Zfish   289 FLFEGFPYEKVVQRTLYLQVLDYDRFSRNDPIGEVSIPLNKVELVPMQTLWKELKPCSDGSGSR- 352

  Fly   325 KLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLN 389
              ||:..||.|.|||..:||.|::|:|||.||:||.||||||:.:|...||::||||.:.|..||
Zfish   353 --GDLLVSLCYNPTANIITVSIIKARNLKAMDIGGTSDPYVKVWLMNKDKRVEKKKTVVMKRCLN 415

  Fly   390 PYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPI 454
            |.:||||.|:||...:::..:|:||:|.||:..::.||:..|.......|::||.||::.||..:
Zfish   416 PVFNESFPFDVPAHVLRETTIVITVMDKDRLSRNDVIGKIYLSWKSGPAEVKHWKDMMSHPRTAV 480

  Fly   455 AQWHTLK 461
            ||||.||
Zfish   481 AQWHALK 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 60/123 (49%)
C2B_Synaptotagmin-1 326..461 CDD:176047 63/134 (47%)
syt7bNP_001232886.1 C2A_Synaptotagmin-7 220..344 CDD:176032 60/123 (49%)
C2B_Synaptotagmin-7 352..487 CDD:176050 63/137 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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