DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt1b

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_021323234.2 Gene:syt1b / 100034471 ZFINID:ZDB-GENE-060503-166 Length:404 Species:Danio rerio


Alignment Length:368 Identity:197/368 - (53%)
Similarity:254/368 - (69%) Gaps:24/368 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QEQEVLAEKAAEAAS--QRIAQVESTTRSATTEAQESTTTAVPVIKKIEHVGEVVTEVIAERTGL 110
            ::...||..::..||  |:.:::..:|.|:.|.....||||..::..|.  .:.:.|:  .:..|
Zfish    27 EDDAPLAASSSSPASLAQKESKIPGSTISSPTAVHPQTTTADSLVHSIR--SKFLNEL--HKVPL 87

  Fly   111 PTWGVVAIIILVFLVVFGIIFFCV----RRFLKKRRTKDGK---GKKGVDMKSVQLLGSAYKEKV 168
            |:|...|   |.|:.||.::..|:    :...||::.|.||   .|..::|.:|:..|:  |:.|
Zfish    88 PSWATAA---LGFITVFIVLSCCLCIFRKMIFKKKKEKGGKEKNEKNDINMSNVKEEGT--KQAV 147

  Fly   169 QPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVK 233
            ....:   .:|:|.|.|.|:: ||||:|.:.|:|:|..::|.|.||:||.|.|:||.||||||||
Zfish   148 HHTTD---SDAKEEDSESKEA-QKLGKLLYTLDYNFTDSTLIVGVIRAEGLAAMDMSGTSDPYVK 208

  Fly   234 VYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVP 298
            ||||||||||||||||||||.|.|||.|||| :|||:...||||..::|||||||||.||:|::.
Zfish   209 VYLLPDKKKKFETKVHRKTLEPTFNEHFTFK-VPYAELGGKTLVMTVYDFDRFSKHDAIGDVRLQ 272

  Fly   299 LCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDP 363
            :..:|.:...||||||...|.| .||:|||||.||||||||||||||:|||||||||||||||||
Zfish   273 MNKVDFSHLTEEWRDLQKAEKE-EQERLGDICLSLRYVPTAGKLTVVVLEAKNLKKMDVGGLSDP 336

  Fly   364 YVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQ 406
            ||||.:||||||||||||:|||.|||||||||||||||.||||
Zfish   337 YVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPSEQIQ 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 28/107 (26%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 79/123 (64%)
C2B_Synaptotagmin-1 326..461 CDD:176047 74/81 (91%)
syt1bXP_021323234.2 None

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