DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt17

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_001922508.4 Gene:syt17 / 100000374 ZFINID:ZDB-GENE-090527-1 Length:474 Species:Danio rerio


Alignment Length:318 Identity:123/318 - (38%)
Similarity:191/318 - (60%) Gaps:16/318 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 YKEKVQPDMEELTENAEEGD---EEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELP----- 220
            |..|::|.:..|...:::.|   :|:.....:||.|:|..:||..:..|.|.||:|.:||     
Zfish   153 YFRKLEPHLYSLDSCSDDVDSLTDEEILMRYQLGMLHFSTQYDLINAHLIVRVIEARDLPPPVTC 217

  Fly   221 ---ALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFD 282
               ..|| ..|:||||:.||||.|...:|.|.|||.:|||.|.||| .||:.:|..:||:.::.|
Zfish   218 DGARQDM-AHSNPYVKMSLLPDNKNSRQTGVKRKTQNPVFEERFTF-DLPFLEAQRRTLLLSVVD 280

  Fly   283 FDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVIL 347
            ||:||:|..||:|.:||..:||.:....|:.|  |.....:.:||::..||.|:|:||:|.|.|:
Zfish   281 FDKFSRHCVIGKVALPLSEVDLVKGGHWWKAL--VPSSQNEVELGELLLSLNYLPSAGRLNVDII 343

  Fly   348 EAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVV 412
            .||.|.:.|:...|||:||:.::...|.:|.||||..:.|::|.|||||||.||.|.:.::.||:
Zfish   344 RAKQLLQTDMCQGSDPFVKVQLVTGLKLMKSKKTSCMRGTIDPCYNESFSFRVPQEDLCEVSLVL 408

  Fly   413 TVVDYDRIGTSEPIGRCILGCMGTG-TELRHWSDMLASPRRPIAQWHTLKDPEETDEI 469
            ||..::...:::.:||.::|...:| .|..||..:|:|.|.|:.|||:|:...|.|.:
Zfish   409 TVYGHNVKSSNDFVGRIVIGQFSSGPQETTHWRRLLSSQRTPVEQWHSLRSRAECDRV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 57/131 (44%)
C2B_Synaptotagmin-1 326..461 CDD:176047 56/135 (41%)
syt17XP_001922508.4 C2A_Synaptotagmin-15-17 186..314 CDD:176036 56/131 (43%)
C2B_Synaptotagmin-17 323..457 CDD:176055 55/133 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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