DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15399 and LIP1

DIOPT Version :10

Sequence 1:NP_608712.1 Gene:CG15399 / 33472 FlyBaseID:FBgn0031460 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_568996.1 Gene:LIP1 / 836603 AraportID:AT5G64813 Length:342 Species:Arabidopsis thaliana


Alignment Length:135 Identity:39/135 - (28%)
Similarity:65/135 - (48%) Gaps:31/135 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VRILMLGDRGVGKTSLTNLM-ATTEITPTPDS--RTVGEESWHVQVRLHEYSKPVILPPTPTWTT 73
            ||:|::||.|||||||.:|: ..:.|...|.:  .|||.:  |:                 |:.:
plant    23 VRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK--HI-----------------TYGS 68

  Fly    74 PSSSEDSENYPYMRSTPTTTNILYFVEFYDLNSDWRMCRQQRESFYKNIDGIVLVYNMLELSSQD 138
            |:||..|......|.        :|||.:|::...|. :..|..||..|:|::.|:::.:..::.
plant    69 PASSSSSIQGDSERD--------FFVELWDVSGHERY-KDCRSLFYSQINGVIFVHDLSQRRTKT 124

  Fly   139 SLHDW 143
            ||..|
plant   125 SLQKW 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15399NP_608712.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..229 CDD:476819 39/135 (29%)
LIP1NP_568996.1 PLN00023 2..342 CDD:177661 39/135 (29%)

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