DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15399 and RabX4

DIOPT Version :9

Sequence 1:NP_608712.1 Gene:CG15399 / 33472 FlyBaseID:FBgn0031460 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster


Alignment Length:240 Identity:47/240 - (19%)
Similarity:79/240 - (32%) Gaps:87/240 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VPTVRILMLGDRGVGKTSLTNLMATTEITPTPDSRTVGEESWHVQVRLHEYSKPVILPPTPTWTT 73
            |.|.::|:|||..||||.:                            :|.|.             
  Fly     6 VATYKVLVLGDSNVGKTCI----------------------------VHRYC------------- 29

  Fly    74 PSSSEDSENYPYMRSTPTTTNILYFVEFYD--LNSD--------WRMCRQQR-----ESFYKNID 123
                 |.:.|....||       ..::|..  :|.|        |....|:|     .::|:...
  Fly    30 -----DEKYYDTYIST-------IGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLTTAYYRGAM 82

  Fly   124 GIVLVYNMLELSSQDSLHDWLYDPLRQICKHRHLRIRSILKNHNAPILVVGTNLDKLMRRPLRRR 188
            ||:|:|::..|.|.::|..|    ||.|.::....:..:|..:..........:||      .|.
  Fly    83 GILLMYDVTNLESYNNLSYW----LRNIQENASPDVVKVLAGNKCECSATQRMVDK------ERG 137

  Fly   189 GSIAHQLNVEEMLVNCLDPQSFVDKSRNQGKLYGFLNRVIEFKEQ 233
            ..||...::....|:|....:..|         .||:...:.:||
  Fly   138 EKIAENFDMPFFEVSCKSNINIED---------AFLSLARKIREQ 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15399NP_608712.1 P-loop_NTPase 12..229 CDD:304359 43/231 (19%)
RabX4NP_733043.1 RAB 9..170 CDD:197555 43/232 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47980
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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