DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15399 and Rab9E

DIOPT Version :9

Sequence 1:NP_608712.1 Gene:CG15399 / 33472 FlyBaseID:FBgn0031460 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster


Alignment Length:212 Identity:46/212 - (21%)
Similarity:80/212 - (37%) Gaps:54/212 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RILMLGDRGVGKTSLTNLMATTEITPTPDSRTVGEESWHVQVRLHEYSKPVILPPTPTWTTPSSS 77
            :|::|||.|||||.|....:..:.| |....|:|.:.....|...::....:|   ..|.|    
  Fly     9 KIIILGDSGVGKTCLLMRFSDNQFT-TRHRSTLGMDRRECSVEFADWRMGRML---QVWDT---- 65

  Fly    78 EDSENYPYMRSTPTTTNILYFVEFYDLNSDWRMCRQQRESFYKNIDGIVLVYNMLELSSQDSLHD 142
            .|.|.:..:::|                    .||        :..||:|||::....|..::..
  Fly    66 SDDERFKLLKAT--------------------HCR--------SAHGILLVYDITSSKSFQNIDG 102

  Fly   143 WLYDPLRQICKHRHLRIRSILKNHNAPILVVGTNLDKLMRRPLRRRGSIAHQLNVEEMLVNCLDP 207
            |:.: :|::|..:.:            :|:||...|.    |..|:.|:|...|.......|.:.
  Fly   103 WMKE-IRRLCPDKVI------------VLLVGNKSDD----PNHRQVSMAQGFNYAHRQSICFEE 150

  Fly   208 QSFVDKSRNQGKLYGFL 224
            .| ....||...::..|
  Fly   151 VS-AKSGRNVYDIFSSL 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15399NP_608712.1 P-loop_NTPase 12..229 CDD:304359 46/212 (22%)
Rab9ENP_727438.1 RAB 8..171 CDD:197555 46/212 (22%)
Rab 8..167 CDD:206640 46/212 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47980
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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