DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and MGC108450

DIOPT Version :10

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001015800.1 Gene:MGC108450 / 548517 XenbaseID:XB-GENE-29099143 Length:301 Species:Xenopus tropicalis


Alignment Length:308 Identity:96/308 - (31%)
Similarity:144/308 - (46%) Gaps:37/308 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RKANPVKSFL---TGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEG 72
            |..|.:::.:   .|..||...||:|.|.||.||::||.|       .||||..|||.||.|..|
 Frog     2 RSNNSIQAAIDLTAGAAGGTACVLTGQPFDTAKVKMQTFP-------SLYRGLMDCAVKTYKQMG 59

  Fly    73 VRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQR----GEDAKLTYPQIFVAGSFSGLFSTLIM 133
            :.|.|||.|..|.......::.|..|...::..:|    .::|:|.......||||:..|:.|.:
 Frog    60 LTGFYKGTSPALLANISENSVLFMSYGFCQKAVRRIVGLDKNAELNDLHNATAGSFAAAFAALAL 124

  Fly   134 APGERIKVLLQTQQ----------GQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPA 188
            .|.|.:|..||...          ||      |.:......:.:..|....:.|..:||||::|.
 Frog   125 CPTELVKCRLQAMHEMTLSGKVTVGQ------NTVWSVVKSILRTDGPMGFYHGLSSTMLREVPG 183

  Fly   189 NGLYFLVYEALQD----VAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGT 249
            ...:|..||..:.    ..|:|.:.|.:   ..|.:|||.|::.|::..|.|.:|||:|......
 Frog   184 YFFFFGGYELSRSCFVTTGKTKDDLGIV---PLIISGGVGGISLWLVVFPVDCVKSRIQVLSMTG 245

  Fly   250 YKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANK 297
            .:.|..|.|..::..:|.:|||.|:.|.::||||||.|.|...|.:.|
 Frog   246 KQAGFLSTFGRILRNEGVMALYSGLKPTLIRAFPANGALFVAYEYSRK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 34/97 (35%)
Mito_carr 112..202 CDD:395101 25/103 (24%)
Mito_carr 210..299 CDD:395101 32/88 (36%)
MGC108450NP_001015800.1 Mito_carr 9..90 CDD:395101 33/87 (38%)
Mito_carr 103..195 CDD:395101 25/97 (26%)
Mito_carr 206..297 CDD:395101 32/91 (35%)

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