DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and slc25a48

DIOPT Version :9

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001002367.1 Gene:slc25a48 / 436640 ZFINID:ZDB-GENE-040718-60 Length:309 Species:Danio rerio


Alignment Length:327 Identity:96/327 - (29%)
Similarity:141/327 - (43%) Gaps:75/327 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAP 83
            ||.|..||..:|:.||||||:|.|||.      |:.  |:.||.|.....|.|.|.|.:||:|.|
Zfish     9 FLAGWIGGASSVIVGHPLDTVKTRLQA------GKG--YKNTFHCVVTIYKKENVIGFFKGLSFP 65

  Fly    84 LTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYP----QIFVAGSFSGLFSTLIMAPGERIKVLLQ 144
            |..:....:|.|..::..:||..:.......:|    .:.||...:||.|..:.||.:.:|:.||
Zfish    66 LASITLYNSMVFGFFSNTQRLISKYRYGDGRHPCSMLDLTVASMLTGLVSVGVGAPVDLVKIRLQ 130

  Fly   145 TQ-----------QGQG----------GERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPA 188
            .|           .|.|          .:..|.|.:.|...:.:..|::.:::|:.|.:|||:|.
Zfish   131 MQTQPVLAENFNLAGNGSVPLRSMGIQSQSFYRGPLHCISTVLQNEGIQGLYRGAGAMILRDIPG 195

  Fly   189 NGLYFLVYEALQDVAKSKSETGQISTASTIF-------------------AGGVAGMAYWILGMP 234
            ..|||:.|                    |:|                   |||:||...|:...|
Zfish   196 YALYFIPY--------------------TLFCNWLNPDDNSSPPPCCIWLAGGLAGSISWVTATP 240

  Fly   235 ADVLKSRLQ--SAPEGTYKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANK 297
            :||:|||||  :..:..|| ||..........:|....:||.|...:|.||..|..|.|.||:.:
Zfish   241 SDVVKSRLQADAMHQRKYK-GILHCIMQSYRTEGIHVFFRGATVNAIRGFPMCATMFLGYELSLQ 304

  Fly   298 FF 299
            ||
Zfish   305 FF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 34/87 (39%)
Mito_carr 112..202 CDD:395101 28/114 (25%)
Mito_carr 210..299 CDD:395101 32/109 (29%)
slc25a48NP_001002367.1 Solcar 1 3..86 32/84 (38%)
PTZ00169 6..289 CDD:240302 87/308 (28%)
Mito_carr 8..91 CDD:278578 34/89 (38%)
Solcar 2 99..209 29/129 (22%)
Mito_carr 106..210 CDD:278578 29/123 (24%)
Solcar 3 218..305 30/87 (34%)
Mito_carr 224..307 CDD:278578 32/84 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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