DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and slc25a40

DIOPT Version :10

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001002360.1 Gene:slc25a40 / 436633 ZFINID:ZDB-GENE-040718-52 Length:353 Species:Danio rerio


Alignment Length:328 Identity:84/328 - (25%)
Similarity:137/328 - (41%) Gaps:57/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRP------------------------------ 49
            |.:..:....|.|...|...|||.:|:|||....|                              
Zfish    16 PFQQMMASCSGAIITSLLVTPLDVVKIRLQAQKNPFPKGKCFVYCNGLMDHICVCENGNTKVWYK 80

  Fly    50 APGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGY----ALGK-RLQQRGE 109
            |||.   :.||.|...|.|:.||:|.|:.|:...|....|...:.|..|    ||.| ::..|.:
Zfish    81 APGH---FSGTLDAFLKIIRMEGIRSLWSGLPPTLIMAVPATVIYFTCYDQLFALLKLKMGDRSD 142

  Fly   110 DAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSV 174
            .|.|      .||:.:.:.|..:::|.|.|:..:|::     ::.|..|........|..||||:
Zfish   143 LAPL------FAGAIARVGSATVISPLELIRTKMQSE-----KQSYREMSAVIRSALKNEGLRSL 196

  Fly   175 FKGSCATMLRDLPANGLYFLVYEALQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLK 239
            ::|...|:|||:|.:.:|:..||..:.....:....:.:.|.|..||.::|....|:.:|.||:|
Zfish   197 WRGWGPTLLRDVPFSAMYWFNYEKGKWWLCKRYSCSEPTVAITFTAGALSGSIASIITLPFDVVK 261

  Fly   240 SR-------LQSAPEGT-YKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELAN 296
            ::       ||:....| ......||.|.::.::|...|:.|..|.:::..||.|......|...
Zfish   262 TKRQVEMGELQTMKLSTQVSSSTCSVMKRIVAENGVSGLFAGFMPRLIKVAPACAIMISTYEFGK 326

  Fly   297 KFF 299
            .||
Zfish   327 AFF 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 32/126 (25%)
Mito_carr 112..202 CDD:395101 24/89 (27%)
Mito_carr 210..299 CDD:395101 24/96 (25%)
slc25a40NP_001002360.1 Mito_carr 12..129 CDD:395101 29/115 (25%)
Solcar 1 14..132 29/118 (25%)
Solcar 2 140..224 26/94 (28%)
Mito_carr 143..229 CDD:395101 25/96 (26%)
Mito_carr 232..333 CDD:395101 26/98 (27%)
Solcar 3 234..328 24/93 (26%)

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