DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and CG4743

DIOPT Version :10

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster


Alignment Length:292 Identity:79/292 - (27%)
Similarity:128/292 - (43%) Gaps:33/292 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VSTERKANPVKSF---LTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTI 68
            :..:...|.:|.|   :.||..|:...::..|:||:|.|||:       |...:|.         
  Fly    16 IKMQEPVNKLKFFHALVAGGVAGMVVDIALFPIDTVKTRLQS-------ELGFWRA--------- 64

  Fly    69 KNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIM 133
              .|.||:|||::....|.||..|:.|..|..||:........|.:......|.|.:.:.:.||.
  Fly    65 --GGFRGIYKGLAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIR 127

  Fly   134 APGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGL-RSVFKGSCATMLRDLPANGLYFLVYE 197
            .|.|..|...||.||    .|.:| :....:.|:..|| |.:::|..:|::|::|.:.:.|.::|
  Fly   128 VPVEIAKQRSQTLQG----NKQSG-LQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWE 187

  Fly   198 ALQDVAKSKSETGQISTA-STIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTY--KHGIRSVFK 259
            ..:  .:....||..||. |....|.|||.....|..|.||:|:|:..|...:.  :...|.:..
  Fly   188 YFK--LQWTPLTGFDSTPFSVALCGAVAGGISAGLTTPLDVVKTRIMLAERESLNRRRSARRILH 250

  Fly   260 DLIVKDGPLALYRGVTPIMLRAFPANAACFFG 291
            .:.::.|...|:.|..|.:| ......|.|||
  Fly   251 GIYLERGFSGLFAGFVPRVL-WITLGGAFFFG 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 29/97 (30%)
Mito_carr 112..202 CDD:395101 24/90 (27%)
Mito_carr 210..299 CDD:395101 25/85 (29%)
CG4743NP_651415.1 PTZ00168 25..281 CDD:185494 76/281 (27%)

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