Protein Alignment colt and GC1

DIOPT Version :9

• Sequence 1: NP_477221.1
• Gene: colt / 33470
• FlyBaseID: FBgn0019830
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_001262490.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Alignment Length: 287
• Identity: 83/287 - (28%)
• Similarity: 128/287 - (44%)
• Gaps: 24/287 - (8%)

  Fly    20 LTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPL 84
            :.||..||..|....|||.:|.|||.. :..|..:.:|...|||..||.|.||..|:|:|....:
  Fly    26 INGGIAGIIGVTCVFPLDLVKTRLQNQ-QIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNI 89

  Fly    85 TGVAPIFAMCFAG--YALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQQ 147
            ..:.|..|:....  |.   |.:...:|.||......|||..:|.|..::..|.|.:|:.:|...
  Fly    90 LLITPEKAIKLTANDYF---RHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAG 151

  Fly   148 GQGGERKYNG-------MIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEALQDVAKS 205
            ......|..|       ....|.:|.|:.|:..::||..||.|||:..:.:||.::..|.|:...
  Fly   152 RVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPR 216

  Fly   206 KSE-TGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAP----EGTYKHGIRSVFKDLIVKD 265
            ::: :|:.....:..||..||....:...|.||:|:|||:..    |..:| ||.......:..:
  Fly   217 RNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFK-GISDCITKTLKHE 280

  Fly   266 GPLALYRGVTPIMLRAFPANAACFFGI 292
            ||.|.::|....|:...|     .|||
  Fly   281 GPTAFFKGGLCRMIVIAP-----LFGI 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
colt	NP_477221.1	Mito_carr	12..107	CDD:395101	29/88 (33%)
		Mito_carr	112..202	CDD:395101	27/96 (28%)
		Mito_carr	210..299	CDD:395101	25/87 (29%)
GC1	NP_001262490.1	Mito_carr	36..113	CDD:278578	25/80 (31%)
		Mito_carr	115..213	CDD:278578	27/97 (28%)
		Mito_carr	226..307	CDD:278578	24/83 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441748
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840