DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and slc25a20

DIOPT Version :9

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_957153.1 Gene:slc25a20 / 393833 ZFINID:ZDB-GENE-040426-1869 Length:300 Species:Danio rerio


Alignment Length:303 Identity:169/303 - (55%)
Similarity:221/303 - (72%) Gaps:8/303 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VSTERKANPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNE 71
            :|.::..:|:|:|..|||||:|.|.:|||||||||||||.|:|.|||...|.|||||..||:..|
Zfish     1 MSKQQPISPMKNFFAGGFGGVCLVFAGHPLDTIKVRLQTQPKPRPGEVAQYAGTFDCFKKTLAKE 65

  Fly    72 GVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPG 136
            |||||||||:||:.||.|:||:||.|:.|||:|||:..|..|||||:|.||..||:|:|.|||||
Zfish    66 GVRGLYKGMAAPIIGVTPMFAVCFFGFGLGKKLQQKTPDDILTYPQLFAAGMLSGVFTTAIMAPG 130

  Fly   137 ERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYE---- 197
            ||||.|||. |...|:.||.|.:||..:||:|.|:|.::||:..|::||:||:|:||:.||    
Zfish   131 ERIKCLLQI-QAASGQVKYAGPMDCVKQLYRESGIRGIYKGTALTLMRDVPASGMYFMTYEWLKH 194

  Fly   198 ALQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIRSVFKDLI 262
            ||....||.||   :|..|.:||||:||:..|.:.:|.||||||.|:||||.|.:|.|.|.::|:
Zfish   195 ALTPEGKSPSE---LSVPSILFAGGMAGIFNWAVAIPPDVLKSRFQTAPEGKYPNGFRDVLRELV 256

  Fly   263 VKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFNIVAPN 305
            .::|..:||:|...:||||||||||||.|.|:|.||.|.:|||
Zfish   257 REEGVRSLYKGFNAVMLRAFPANAACFLGFEVAMKFLNWIAPN 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 61/94 (65%)
Mito_carr 112..202 CDD:395101 50/93 (54%)
Mito_carr 210..299 CDD:395101 46/88 (52%)
slc25a20NP_957153.1 Mito_carr 5..101 CDD:278578 61/95 (64%)
PTZ00169 10..276 CDD:240302 149/269 (55%)
Mito_carr 107..197 CDD:278578 49/90 (54%)
Mito_carr 204..293 CDD:278578 48/91 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 141 1.000 Domainoid score I4679
eggNOG 1 0.900 - - E1_KOG0758
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H331
Inparanoid 1 1.050 351 1.000 Inparanoid score I2239
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 1 1.000 - - mtm6581
orthoMCL 1 0.900 - - OOG6_102800
Panther 1 1.100 - - LDO PTHR45624
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1756
SonicParanoid 1 1.000 - - X2353
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.870

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