DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and slc25a20

DIOPT Version :10

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_957153.1 Gene:slc25a20 / 393833 ZFINID:ZDB-GENE-040426-1869 Length:300 Species:Danio rerio


Alignment Length:303 Identity:169/303 - (55%)
Similarity:221/303 - (72%) Gaps:8/303 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VSTERKANPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNE 71
            :|.::..:|:|:|..|||||:|.|.:|||||||||||||.|:|.|||...|.|||||..||:..|
Zfish     1 MSKQQPISPMKNFFAGGFGGVCLVFAGHPLDTIKVRLQTQPKPRPGEVAQYAGTFDCFKKTLAKE 65

  Fly    72 GVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPG 136
            |||||||||:||:.||.|:||:||.|:.|||:|||:..|..|||||:|.||..||:|:|.|||||
Zfish    66 GVRGLYKGMAAPIIGVTPMFAVCFFGFGLGKKLQQKTPDDILTYPQLFAAGMLSGVFTTAIMAPG 130

  Fly   137 ERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYE---- 197
            ||||.|||. |...|:.||.|.:||..:||:|.|:|.::||:..|::||:||:|:||:.||    
Zfish   131 ERIKCLLQI-QAASGQVKYAGPMDCVKQLYRESGIRGIYKGTALTLMRDVPASGMYFMTYEWLKH 194

  Fly   198 ALQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIRSVFKDLI 262
            ||....||.||   :|..|.:||||:||:..|.:.:|.||||||.|:||||.|.:|.|.|.::|:
Zfish   195 ALTPEGKSPSE---LSVPSILFAGGMAGIFNWAVAIPPDVLKSRFQTAPEGKYPNGFRDVLRELV 256

  Fly   263 VKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFNIVAPN 305
            .::|..:||:|...:||||||||||||.|.|:|.||.|.:|||
Zfish   257 REEGVRSLYKGFNAVMLRAFPANAACFLGFEVAMKFLNWIAPN 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 61/94 (65%)
Mito_carr 112..202 CDD:395101 50/93 (54%)
Mito_carr 210..299 CDD:395101 46/88 (52%)
slc25a20NP_957153.1 Mito_carr 5..101 CDD:395101 61/95 (64%)
Mito_carr 107..197 CDD:395101 49/90 (54%)
Mito_carr 204..293 CDD:395101 48/91 (53%)

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