DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and Ucp4A

DIOPT Version :10

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_573246.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster


Alignment Length:284 Identity:71/284 - (25%)
Similarity:122/284 - (42%) Gaps:23/284 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LSGHPLDTIKVRLQTMPRPA---PGEQPL-YRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIF 91
            |:.:|||..|.|||.....|   .|:..: |||....|....:.||...|::|::..|.......
  Fly    56 LATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGIAREEGALKLWQGVTPALYRHVVYS 120

  Fly    92 AMCFAGYAL-GKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQQGQGGERKY 155
            .:....|.| .|...|.|..| |...:..:.|..:|..:..:.:|.:.:||.:|.:    |.|:.
  Fly   121 GVRICSYDLMRKEFTQNG
TQA-LPVWKSALCGVTAGAVAQWLASPADLVKVQIQME----GRRRL 180

  Fly   156 NG---MIDCAGKLYKE----GGLRSVFKGSCATMLRDLPANGLYFLVYEALQDVAKSKSETGQIS 213
            .|   .:..||..:::    ||::.::|||...:.|....|......|:.::.:..::.:.....
  Fly   181 MGEPPRVHSAGHAFRQIVQRGGIKGLWKGSIPNVQRAALVNLGDLTTYDTIKHLIMNRL
QMPDCH 245

  Fly   214 TASTIFAGGVAGMAYWILGMPADVLKSRLQSAP-----EGTYKHGIRSVFKDLIVKDGPLALYRG 273
            |.. :.|...||....|:|.||||:|:|:.:.|     .|....|.....:..:.|:|.:|||:|
  Fly   246 TVH-VLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSVDCLRQTVSKEGFVALYKG 309

  Fly   274 VTPIMLRAFPANAACFFGIELANK 297
            ..|..:|..|.:...:...|...|
  Fly   310 FLPCWIRMAPWSLTFWLSFEQIRK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 22/80 (28%)
Mito_carr 112..202 CDD:395101 20/96 (21%)
Mito_carr 210..299 CDD:395101 26/93 (28%)
Ucp4ANP_573246.1 Mito_carr 39..138 CDD:395101 23/81 (28%)
Mito_carr 142..239 CDD:395101 20/100 (20%)
Mito_carr 248..336 CDD:395101 25/87 (29%)

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