DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and sesB

DIOPT Version :10

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_727448.1 Gene:sesB / 32007 FlyBaseID:FBgn0003360 Length:312 Species:Drosophila melanogaster


Alignment Length:278 Identity:65/278 - (23%)
Similarity:122/278 - (43%) Gaps:20/278 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VKSFLTGGFGGICNVLSGHPLDTIKVRLQTM---PRPAPGEQPLYRGTFDCAAKTIKNEGVRGLY 77
            ||.|..||.....:..:..|::.:|:.||..   .:.:|.:|  |:|..||..:..|.:|....:
  Fly    24 VKDFAAGGISAAVSKTAVAPIERVKLLLQVQHISKQISPDKQ--YKGMVDCFIRIPKEQGFSSFW 86

  Fly    78 KGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIF----VAGSFSGLFSTLIMAPGER 138
            :|..|.:....|..|:.||.....|::...|.|....:.:.|    .:|..:|..|...:.|.:.
  Fly    87 RGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDF 151

  Fly   139 IKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEALQDVA 203
            .:..|....|:||:|::.|:.:|..|::|..|:..:::|...::...:.....||..|:..:.:.
  Fly   152 ARTRLAADTGKGGQREFTGLGNCLTKIFKSDGIVGLYRGFGVSVQGIIIYRAAYFGFYDTARGML 216

  Fly   204 KSKSETG-QISTASTIFAGGVAGMAYWILGMPADVLKSRL-----QSAPEGTYKHGIRSVFKDLI 262
            .....|. .||.|.......|||    |:..|.|.::.|:     :.|.|..||:.:. .:..:.
  Fly   217 PDPKNTPIYISWAIAQVVTTVAG----IVSYPFDTVRRRMMMQSGRKATEVIYKNTLH-CWATIA 276

  Fly   263 VKDGPLALYRGVTPIMLR 280
            .::|..|.::|....:||
  Fly   277 KQEGTGAFFKGAFSNILR 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 24/93 (26%)
Mito_carr 112..202 CDD:395101 19/93 (20%)
Mito_carr 210..299 CDD:395101 19/77 (25%)
sesBNP_727448.1 PTZ00169 23..312 CDD:240302 65/278 (23%)

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