DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and SPAC4G9.20c

DIOPT Version :9

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_593701.2 Gene:SPAC4G9.20c / 2543680 PomBaseID:SPAC4G9.20c Length:298 Species:Schizosaccharomyces pombe


Alignment Length:288 Identity:100/288 - (34%)
Similarity:148/288 - (51%) Gaps:16/288 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMS 81
            |.||.|..||:..||.|.|.|.:|||||:....:    |:|....||..|..||||:...|||..
pombe    15 KDFLAGVSGGVAQVLVGQPFDCVKVRLQSQSNVS----PIYNNALDCVKKISKNEGLAAFYKGTV 75

  Fly    82 APLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQ 146
            .||.|:....::.|..:...||...| :...:|.||.:|:|:.|||.::.::.|.|.:::.||.|
pombe    76 LPLLGIGFCVSIQFTTFEYCKRFFSR-DGTPVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 139

  Fly   147 QGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEALQDVAKSKSE-TG 210
            .|:  ...|:|..||..|:..:.||..:.||...|..|:....|:|||.||||.....:|.. |.
pombe   140 TGK--NVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMYFLAYEALVKNTMAKHHLTD 202

  Fly   211 QISTAS---TIFAGGVAGMAYWILGMPADVLKSRLQS---APEGTYKHGIRSVFKDLIVKDGPLA 269
            :..|..   .:|..| ||.|.|:...|.|::||::|:   ..:.|||:..:.. |.:..|.|...
pombe   203 RSQTPGWKLCVFGAG-AGYAMWLAAYPFDIVKSKIQTDGFLSKATYKNSWQCA-KGIYTKAGLRG 265

  Fly   270 LYRGVTPIMLRAFPANAACFFGIELANK 297
            .|||..|:::||.||||..|:..|..::
pombe   266 FYRGFVPVLVRAAPANAVTFYVYETVSQ 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 34/89 (38%)
Mito_carr 112..202 CDD:395101 33/89 (37%)
Mito_carr 210..299 CDD:395101 30/94 (32%)
SPAC4G9.20cNP_593701.2 PTZ00169 15..286 CDD:240302 98/279 (35%)
Mito_carr 15..103 CDD:278578 35/92 (38%)
Mito_carr 105..198 CDD:278578 33/94 (35%)
Mito_carr 204..297 CDD:278578 30/92 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 66 1.000 Domainoid score I2789
eggNOG 1 0.900 - - E1_KOG0758
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1238
OMA 1 1.010 - - QHG54095
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1756
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.900

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