DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and T10F2.2

DIOPT Version :9

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001380014.1 Gene:T10F2.2 / 188387 WormBaseID:WBGene00020422 Length:301 Species:Caenorhabditis elegans


Alignment Length:309 Identity:98/309 - (31%)
Similarity:144/309 - (46%) Gaps:25/309 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TTTENVSTERKANPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAK 66
            |.|.:.|.....:.:...|.|..|||.||.:|.||||:||::||.|.       ||.....|...
 Worm     9 TATGDASANHFKDGIIDLLAGTAGGIANVYAGQPLDTVKVKVQTFPN-------LYSNWIVCLKD 66

  Fly    67 TIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKR----LQQRGEDAKLTYPQIFVAGSFSGL 127
            |.|.:|:||||.|....|.......|:.|..|...::    |....:..::|..:...:||.:.:
 Worm    67 TYKLDGIRGLYAGTLPALAANVAENAVLFTAYGYCQKTIATLNGLEDVRQMTPLENAFSGSLAAV 131

  Fly   128 FSTLIMAPGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLY 192
            |:..::.|.|.:|..||..:..  ::|......|. .:.|:.|:|..|.|...|:.|::|....:
 Worm   132 FAATVLCPTELVKCKLQAAREM--KKKCTPFSVCR-DIMKDTGVRGFFVGMTPTLAREVPGYFFF 193

  Fly   193 FLVYEA----LQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHG 253
            |..||.    |.|..:.|.|.|.:.||   .||.|.|||.|....||||:|||:|....||:...
 Worm   194 FGAYETCRFLLTDEGQKKEEIGLVKTA---MAGSVGGMALWTSIYPADVVKSRMQVTGGGTFMST 255

  Fly   254 IRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFNIV 302
            :.:|.|:    :|...||:|:.|..||...|:...|...|...|||:.|
 Worm   256 LGAVVKE----NGIRGLYKGLLPTNLRTCFASGCLFVAYEETRKFFHYV 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 33/98 (34%)
Mito_carr 112..202 CDD:395101 23/93 (25%)
Mito_carr 210..299 CDD:395101 33/88 (38%)
T10F2.2NP_001380014.1 Mito_carr 25..105 CDD:395101 32/86 (37%)
Mito_carr 116..208 CDD:395101 24/94 (26%)
Mito_carr 212..298 CDD:395101 35/92 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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