DRSC/TRiP Functional Genomics Resources

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Protein Alignment colt and Slc25a20

DIOPT Version :9

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_446417.2 Gene:Slc25a20 / 117035 RGDID:621443 Length:301 Species:Rattus norvegicus


Alignment Length:293 Identity:154/293 - (52%)
Similarity:212/293 - (72%) Gaps:2/293 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYK 78
            :|:|:.|.|||||:|.|..||||||:||||||.|...||:.|:|.||.||..||:..||:.|||:
  Rat     9 SPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTIDCFRKTLFREGITGLYR 73

  Fly    79 GMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLL 143
            ||:||:.||.|:||:||.|:.|||||||:..:.:|||||:|.||..||:|:|.||.||||||.||
  Rat    74 GMAAPIIGVTPMFAVCFFGFGLGKRLQQKSPEDELTYPQLFTAGMLSGVFTTGIMTPGERIKCLL 138

  Fly   144 QTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEALQDVAKSKSE 208
            |. |...|:.||:|.:|||.|||:|.|:|..:||:..|::||:||:|:||:.||.|:::...:.:
  Rat   139 QI-QASSGKNKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPQGK 202

  Fly   209 T-GQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIRSVFKDLIVKDGPLALYR 272
            : ..:|....:.|||.||:..|::.:|.||||||.|:||.|.|.:|.|.|.::||.::|..:||:
  Rat   203 SVHDLSVPRVLVAGGFAGIFNWVVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTSLYK 267

  Fly   273 GVTPIMLRAFPANAACFFGIELANKFFNIVAPN 305
            |...:|:||||||||||.|.|:|.|..|.:|||
  Rat   268 GFNAVMIRAFPANAACFLGFEIAMKILNWIAPN 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 56/92 (61%)
Mito_carr 112..202 CDD:395101 50/89 (56%)
Mito_carr 210..299 CDD:395101 43/88 (49%)
Slc25a20NP_446417.2 Mito_carr 6..103 CDD:278578 57/93 (61%)
Solcar 1 8..99 53/89 (60%)
PTZ00169 11..277 CDD:240302 136/266 (51%)
Mito_carr 106..198 CDD:278578 50/92 (54%)
Solcar 2 108..196 50/88 (57%)
Mito_carr 206..294 CDD:278578 43/87 (49%)
Solcar 3 207..293 42/85 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I4930
eggNOG 1 0.900 - - E1_KOG0758
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H331
Inparanoid 1 1.050 328 1.000 Inparanoid score I2381
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 1 1.000 - - otm44491
orthoMCL 1 0.900 - - OOG6_102800
Panther 1 1.100 - - LDO PTHR45624
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2353
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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