DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment colt and si:dkey-150i13.2

DIOPT Version :9

Sequence 1:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster
Sequence 2:XP_001920218.1 Gene:si:dkey-150i13.2 / 100003928 ZFINID:ZDB-GENE-090312-157 Length:296 Species:Danio rerio


Alignment Length:303 Identity:151/303 - (49%)
Similarity:211/303 - (69%) Gaps:9/303 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ENVSTERKANPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIK 69
            :.|.::|:.:|:|:|:.|||||||.:|:|||||||||||||.      :..:|:|||||..||:.
Zfish     2 DTVESDRRVSPLKNFVAGGFGGICLLLAGHPLDTIKVRLQTQ------DCAVYKGTFDCFRKTVS 60

  Fly    70 NEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMA 134
            .||:.||||||.|||.||.|:.|:.|.|:.|||.|.||......||.||::||..:|:.:|:|:|
Zfish    61 KEGIFGLYKGMGAPLAGVTPMMALNFFGFGLGKELLQRDPTVPATYTQIYLAGMLAGVCTTVIVA 125

  Fly   135 PGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEAL 199
            ||||||.|||... ..|..||.|.:|||.:|||:.|:.||:||:..|::||:|:||:|||.|:.|
Zfish   126 PGERIKCLLQILP-LAGRMKYTGPLDCAVRLYKQQGICSVYKGTILTLIRDVPSNGVYFLTYDYL 189

  Fly   200 QDVAKSKSE-TGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIRSVFKDLIV 263
            :.......| ...:||:..:.|||:|||..|::.:|||||||..|||.:|.|: |:|.|.:.|:.
Zfish   190 KHYLTPDGECVHHLSTSRVLLAGGIAGMINWLIALPADVLKSNYQSATDGRYQ-GVRHVLRTLLK 253

  Fly   264 KDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFNIVAPNF 306
            ::|...||:|.:.:||||||||||||.|.|:|.|:.|.:||::
Zfish   254 EEGAQGLYKGFSAVMLRAFPANAACFLGFEVALKYLNYIAPDW 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coltNP_477221.1 Mito_carr 12..107 CDD:395101 53/94 (56%)
Mito_carr 112..202 CDD:395101 45/89 (51%)
Mito_carr 210..299 CDD:395101 45/88 (51%)
si:dkey-150i13.2XP_001920218.1 PTZ00169 6..272 CDD:240302 134/273 (49%)
Mito_carr 9..99 CDD:278578 54/95 (57%)
Mito_carr 103..197 CDD:278578 45/94 (48%)
Mito_carr 202..289 CDD:278578 45/87 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I6498
eggNOG 1 0.900 - - E1_KOG0758
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 351 1.000 Inparanoid score I2239
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 1 1.000 - - mtm6581
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45624
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2353
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.980

Return to query results.
Submit another query.