DRSC/TRiP Functional Genomics Resources

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Protein Alignment aph-1 and aph-1

DIOPT Version :9

Sequence 1:NP_001259963.1 Gene:aph-1 / 33467 FlyBaseID:FBgn0031458 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_492469.1 Gene:aph-1 / 172747 WormBaseID:WBGene00000147 Length:308 Species:Caenorhabditis elegans


Alignment Length:250 Identity:74/250 - (29%)
Similarity:122/250 - (48%) Gaps:27/250 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISSL-WYAL-IPLKEFLAFGVVFSVC 71
            |...:|.|..|||...||:||||||:....:||||:|||.||| |..| ..|.:.....:...:.
 Worm     9 CYIASFSPSIALFCSFIAHDPVRIILFFLGSFFWLVSLLFSSLAWLGLSTVLPDTFLLSLTVCII 73

  Fly    72 FQEAFRYIIYRILRSTEQGLHAVAEDTRVT---------DNKHILAYVSGLGFGIISGMFALVNV 127
            .||..|...:.:|:..::||:.:....:::         :.:|:||.|.|||.|:||.:|..:|.
 Worm    74 AQELSRVAYFMLLKKAQRGLNKITRQGQISVAPGVSDLHNARHMLALVCGLGMGVISALFYTMNA 138

  Fly   128 LADMSGPGTMGLKGGTELFFV-TSAA----------QALSIILLHTFWSVIFFNAFDTNNYIHIG 181
            .|..|||||:||....:...: |:.|          .|:.:.|.|..|:::.:::......|...
 Worm   139 FAIFSGPGTIGLPNALKTGEIDTNRAGKYLPLCYTLSAILLTLFHVTWTIMVWDSCHKIGRIPSA 203

  Fly   182 YV-----VFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGGTSRSF 231
            :|     |.|||.|:.::.||:...:.....:.:|:.::.......:.|||..||
 Worm   204 FVPGAAAVVSHLLVTFLSSLNSRGFHVLVFAVQFLILLICIAYCNVIMGGTISSF 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aph-1NP_001259963.1 Aph-1 2..225 CDD:283708 69/242 (29%)
aph-1NP_492469.1 Aph-1 7..252 CDD:283708 73/249 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159752
Domainoid 1 1.000 111 1.000 Domainoid score I3927
eggNOG 1 0.900 - - E1_KOG3972
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9345
Inparanoid 1 1.050 114 1.000 Inparanoid score I3416
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55474
OrthoDB 1 1.010 - - D1085102at2759
OrthoFinder 1 1.000 - - FOG0003244
OrthoInspector 1 1.000 - - oto20614
orthoMCL 1 0.900 - - OOG6_104863
Panther 1 1.100 - - LDO PTHR12889
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4469
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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