DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx21 and Snx29

DIOPT Version :9

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_038942785.1 Gene:Snx29 / 689142 RGDID:1596162 Length:838 Species:Rattus norvegicus


Alignment Length:88 Identity:24/88 - (27%)
Similarity:42/88 - (47%) Gaps:10/88 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VYE--LTVKQDGATEDTQPAKIERRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKSELIGE 157
            ||:  :.:|.|       ...:.||||:||.|:..|:...|...|.. ||.|..:||..::.:.|
  Rat   700 VYQVYIRIKDD-------EWNVYRRYTEFRGLHHQLQSAFPQVRAYS-FPPKKAIGNKDAKFVEE 756

  Fly   158 RSAAFEAFLTYVASQAMLRDSEY 180
            |....:::|..|.::.:....|:
  Rat   757 RRKQLQSYLRSVMNKVIQMVPEF 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 24/88 (27%)
Snx29XP_038942785.1 RUN 64..197 CDD:397055
COG1340 489..654 CDD:224259
PX_RUN 681..798 CDD:132810 24/88 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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