DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx21 and Snx16

DIOPT Version :9

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_071625.2 Gene:Snx16 / 64088 RGDID:620295 Length:344 Species:Rattus norvegicus


Alignment Length:190 Identity:41/190 - (21%)
Similarity:79/190 - (41%) Gaps:46/190 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SDKALQKGVWERATSAEY--------KPTTDGSTVLRFDILLAHIMPPDGEDVKIKRFVVYELTV 100
            :|.:::.....|.|..::        :|:|  .|:|.::::           .:..:|.||::.|
  Rat    80 TDSSIEYSARPRDTEEQHPDALNWEDRPST--PTILGYEVM-----------EERAKFTVYKILV 131

  Fly   101 KQDGATEDTQPAKIERRYTDFRELYLGLKRQHPAEMANKYF-----PAKVLMGNFKSELIGERSA 160
            |:  :.|::.  .:.||||||..|...||...|.      |     |.:....|:.::.:.:|..
  Rat   132 KE--SPEESW--VVFRRYTDFSRLNDKLKEMFPG------FRLALPPKRWFKDNYNADFLEDRQL 186

  Fly   161 AFEAFLTYVASQAMLRDSEYFLRFLQHD---------ELTRA-CQFLDERRNEMAIPILE 210
            ..:|||..:.:...:.:......||..|         |.:|| |:.|:|....:...:||
  Rat   187 GLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYHLQRELLE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 26/121 (21%)
Snx16NP_071625.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..105 2/21 (10%)
PX_SNX16 105..214 CDD:132809 29/131 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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