DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx21 and snx24

DIOPT Version :9

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001028903.1 Gene:snx24 / 619249 ZFINID:ZDB-GENE-050913-45 Length:172 Species:Danio rerio


Alignment Length:134 Identity:30/134 - (22%)
Similarity:61/134 - (45%) Gaps:35/134 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 DGEDVKIKRFVVYELTVKQDGATEDTQPAKIERRYTDFRELYLGLKR-QHPAEMANKYFPAKVLM 147
            :|..|: |.:.|:::.|...|     :...:|:||::|..|:..||: ..|.|:.:|:      :
Zfish    14 EGSTVE-KGYTVFKIEVLMCG-----RQHTVEKRYSEFHALHRMLKKIIKPPEIPSKH------V 66

  Fly   148 GNFKSELIGERSAAFEAFLTYVASQAMLRDSE----YFLRFLQHDELTRACQFLDERRNEMAIPI 208
            .|:..:::.:|....|.:|     |.::.::|    .||.||             ..|:..::|.
Zfish    67 RNWVPKVLEQRRQGLELYL-----QTIIMENEVLPKIFLDFL-------------NIRHFPSLPK 113

  Fly   209 LENC 212
            .|:|
Zfish   114 TESC 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 26/108 (24%)
snx24NP_001028903.1 PX_SNX22 4..113 CDD:132790 27/128 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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