DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx21 and CG5439

DIOPT Version :9

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster


Alignment Length:134 Identity:33/134 - (24%)
Similarity:59/134 - (44%) Gaps:25/134 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SDKALQKGVWERATSAEYKPT-TDGSTVL--RFDILLAHIMPPDGEDVKIKR---FVVYELTVKQ 102
            ::.:||..:..|..:.:::.| .|.|:.|  .|.|.:.|:     :..|.:|   ...||:.:  
  Fly   372 AELSLQNRLLIRRLTKQFEETGIDPSSSLCSNFLITIPHV-----KLAKTQRSGSHYTYEVHI-- 429

  Fly   103 DGATEDTQPAKIE-----RRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKSELIGERSAAF 162
                  |...::|     |||::|.:|:..|.:.||...|.: ||.|...||.....:.||....
  Fly   430 ------TMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAVE-FPPKKHFGNMNLVFVEERRQQL 487

  Fly   163 EAFL 166
            :.:|
  Fly   488 QIYL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 27/106 (25%)
CG5439NP_609607.1 RUN 64..206 CDD:280855
PX_RUN 404..520 CDD:132810 26/102 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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