DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx21 and Snx14

DIOPT Version :10

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_063121634.1 Gene:Snx14 / 315871 RGDID:1310921 Length:985 Species:Rattus norvegicus


Alignment Length:205 Identity:36/205 - (17%)
Similarity:63/205 - (30%) Gaps:78/205 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 PPDGEDVKIKRFVVYELTVKQD---GATEDTQPAKIERRYTDFRELYLGLKRQHPAEMANKYFPA 143
            |......|.:|..|:.:.|:::   ....:.:...:.|||.:|..|...|...| ....:...|:
  Rat   605 PSSERKEKKERIPVFCIDVERNDRRAVGHEPEHWSVYRRYLEFYVLESKLTEFH-GTFPDAQLPS 668

  Fly   144 KVLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFLRFLQHDELTRA-------------CQ 195
            |.::|....|.:..:...|:               ||..:.:||.||:.:             .|
  Rat   669 KRIIGPKNYEFLKSKREEFQ---------------EYLQKLVQHPELSNSQLLADFLSPNGGETQ 718

  Fly   196 FLDE--------------------------------------------RRNEMAI--PILENCFR 214
            |||:                                            .|.|:.|  |..||..:
  Rat   719 FLDKILPDVNLGKIIKSVPGKLMKEKGQHLEPFIMSFINSCESPKPKPSRPELTILSPTSENNKK 783

  Fly   215 LLNKIYMNRS 224
            |.|.::.|.:
  Rat   784 LFNDLFKNNA 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 20/108 (19%)
Snx14XP_063121634.1 None

Return to query results.
Submit another query.