DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx21 and Rps6kc1

DIOPT Version :9

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_006250521.1 Gene:Rps6kc1 / 289342 RGDID:1306578 Length:1045 Species:Rattus norvegicus


Alignment Length:123 Identity:34/123 - (27%)
Similarity:53/123 - (43%) Gaps:19/123 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PDGEDVKIKRF-------------VVYELT--VKQDGATEDTQPAKIERRYTDFRELYLGLKRQH 132
            |.|....:.||             .:|::|  |......||.|...:.|||:||::|:..|.:.|
  Rat     4 PWGHSADLARFYTVTEPQRHPRGYTIYKVTARVVSRRNPEDVQEIIVWRRYSDFKKLHRELWQIH 68

  Fly   133 -PAEMANKYFP--AK-VLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFLRFLQ 186
             .|...::.||  || .:.|.|...:|.||....|..|.:.|:...|.:|:....|.:
  Rat    69 RNAFRHSELFPPFAKGTVFGRFDKTVIEERRQCAEDLLQFSANIPALYNSKQLQDFFK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 34/123 (28%)
Rps6kc1XP_006250521.1 PX_RPK118_like 11..128 CDD:132820 32/116 (28%)
MIT_SNX15 237..305 CDD:239140
PKc_like 334..>420 CDD:304357
STKc_RPK118_like <858..1035 CDD:270728
S_TKc <867..1035 CDD:214567
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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