DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx21 and snx20

DIOPT Version :10

Sequence 1:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_012817668.1 Gene:snx20 / 100495982 XenbaseID:XB-GENE-6036221 Length:326 Species:Xenopus tropicalis


Alignment Length:252 Identity:71/252 - (28%)
Similarity:120/252 - (47%) Gaps:23/252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WERATSAEYKPTTDGSTVLRFDILLAHIMPPDGEDVKIKRFVVYELTVKQDGATEDTQPAKIERR 117
            |::...:. ||.|     |.|:|..|.|    .||. :.:||||::.:.:.|:.::.. ..||||
 Frog    71 WKKEKHSS-KPDT-----LLFEIQSARI----AEDF-LSKFVVYQIVIIRTGSFDENN-VFIERR 123

  Fly   118 YTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFL 182
            |:||.:|:..|.::...||.:..||.|||:|||.:::|.:|....:.:|..:.:...:|.|:.::
 Frog   124 YSDFEKLHRTLLKEFKEEMEDVVFPKKVLIGNFTTDMISKRMLCLKNYLDELYAIKYIRWSKIYI 188

  Fly   183 RFLQHDELTRACQFLDERRNEMAIPILENCFRLLNKIYMNRSRPVLLILCRLVAACTSSPVPHHA 247
            .|....||......|...:.:.|..|.:....|..|:..:.|..::..||.|| .|.........
 Frog   189 DFFLDPELDEGYSCLRGGQYKKATEIFQQIVCLQEKLIQHCSILIVPPLCALV-VCHKDLEDLQK 252

  Fly   248 AERWALLALSRFETLCDIDLLP---LYIPLLHTCAHLWWQRGQDQKPITDRLTDMSK 301
            |....:.||    ||  ::..|   .|||||.|...|.::.|:|...:.::. |:.|
 Frog   253 AYEVGIHAL----TL--VEKHPGHKYYIPLLETLISLAYKLGKDFLSLREKF-DIGK 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 37/116 (32%)
snx20XP_012817668.1 PX_domain 83..196 CDD:470617 37/118 (31%)

Return to query results.
Submit another query.