DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tnpo-SR and KAP122

DIOPT Version :9

Sequence 1:NP_001259961.1 Gene:Tnpo-SR / 33465 FlyBaseID:FBgn0031456 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_011499.1 Gene:KAP122 / 852868 SGDID:S000002984 Length:1081 Species:Saccharomyces cerevisiae


Alignment Length:1102 Identity:220/1102 - (19%)
Similarity:387/1102 - (35%) Gaps:341/1102 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SVDVVYQAISALFQGNNPKEQEKANKWLQDFQKSIYSWTIADELL-HQKRDLHANYFAAQTMRNK 68
            |:..|...|..|:..:...:..:..:.||..|||...:.:|:||| ..|...:..||.|.|:..:
Yeast     3 SIHEVVALIEELYSPHPKHDVNQIQQSLQSIQKSEQGFHLANELLSDDKYSANVKYFGALTLTVQ 67

  Fly    69 IQNSFSELPPHTHESL----RDSL--ITHIGQIDEQTDNV----------IVTQLSL---AVADL 114
            : |:..|   :.:|:|    |.:|  :|....:.....|:          :::.|||   .:.|.
Yeast    68 L-NTRGE---NDYETLWNVFRSNLLYLTKFSTLYVSNPNMYGQSLIIIKKLMSNLSLIFTKINDP 128

  Fly   115 AL-------LMASWREPINDLLVTLAPHQCAIWPLLEVLKVLPEEIDSRYLRLGANRREEVHKQL 172
            .|       ::..|..|||              ..::::.|..:.|::..|.|.:......::||
Yeast   129 QLNNAGNENMIKQWNNPIN--------------TFIQLMSVQNQNINADQLLLDSINCSLTYEQL 179

  Fly   173 DASA-------ECVLKFLCMCLQREDLDQQRVWNAALRTYSAWLVIHAFPVSHVYNNALTQLAFR 230
            ....       |..|.|..:.:  |||.:.:....::..      ||.....|:|.:.:..:...
Yeast   180 SQFVSLSQKHNELALTFTEVIV--EDLTKFQTKRHSMSQ------IHEVVHEHLYISTMALINLN 236

  Fly   231 LLSLPETSGKLHDNATECVCALLSCIN-TR---QDGASDPESSFE-------------------- 271
            |.:    ....:....:|:.|.::.|: ||   ..|..|....|:                    
Yeast   237 LTA----QAVFNPTVFDCITAWINYISLTRSVSSSGRMDLSEIFQNLIDLMYQSTEGSDGYENAE 297

  Fly   272 --AQLFGAV-----------------CMLETPYHLSVAHEDTDKT-------------------- 297
              ..:||.|                 |:.     |.|...|:..|                    
Yeast   298 KILTIFGNVFANDPLLMSYDLRQQIECIF-----LGVVRPDSGITDISNKNSWMLQYMNYLVTND 357

  Fly   298 ------------INYCRIFT-SLCDAFFYDLLA--DAQKPHYSLKGLDLVLLCVGHFD------- 340
                        :::.:|.| |:|:..|.::.|  :.|.....::....|||.:.:|.       
Yeast   358 FFSELKELAICIVDFLQINTLSVCNKLFTNIQAADNGQVQDEYIQEYIKVLLQMTNFPLTPVLQE 422

  Fly   341 -YEVAEITFHLWYKLSEDLFQRNEDKLTVLFRPHIERLISALFRH-------------SQMESDH 391
             :.|..:.|  |..||:.......:.|    ||:...|.:.:|:.             .|...:.
Yeast   423 FFSVRMVDF--WLDLSDAYTNLASETL----RPNSIELSTQIFQQLINIYLPKISLSVKQRIIEE 481

  Fly   392 DGLIEENNNFFDFRRKVSDLIKDVAFIVGSGACFKQMFHIL-----QAPETTWES---------- 441
            :|.....|.|.|||..||||.:.:..|:|:    ..:.::|     |.|..:.|:          
Yeast   482 EGESTSVNEFEDFRNAVSDLAQSLWSILGN----DNLTNVLIDGMGQMPAASDETLIIKDTDVLF 542

  Fly   442 -TEAALFIMQNV-----------AKNILPDENEVIPKVVEAILNMSEQTHIAVRYTAIL------ 488
             .|...|::..:           .|||: |.|:...:.|.::.....||..:.:.:.||      
Yeast   543 RIETMCFVLNTILVDMTLSESPWIKNIV-DANKFFNQNVISVFQTGFQTSASTKVSQILKLDFVR 606

  Fly   489 ----LIGELCDWIENHP-----------ESLEAVLNFLLYALQQK---NGLAPAAAIALTSICSA 535
                |||.|..:.:..|           :.|....||.....|:|   :.|.......::::|..
Yeast   607 TSTTLIGTLAGYFKQEPFQLNPYVEALFQGLHTCTNFTSKNEQEKISNDKLEVMVIKTVSTLCET 671

  Fly   536 CRQKMVCHISGLVEIARSL---DSFQINNDVAIGLLKGISLI----LTRLPREQLQPALREIVGF 593
            ||:::..::...:....::   || .:::.....|::.|..:    ::..|.||.:..|:     
Yeast   672 CREELTPYLMHFISFLNTVIMPDS-NVSHFTRTKLVRSIGYVVQCQVSNGPEEQAKYILQ----- 730

  Fly   594 QLQPLAQLVDST-----GSTPQKGERTDPV----YWI-DRACAIIRHTNPDVPDNVEHPTVAILN 648
                |..|:..:     .|:.|..|:.|.:    |.| :.|.::|:            ||..|.|
Yeast   731 ----LTNLLSGSIEHCLASSVQLQEQQDYINCLLYCISELATSLIQ------------PTEIIEN 779

  Fly   649 DA-----------W-----QLISRVM---DK------YQSDLRIMERTCRLIRYGIRMVRKQAMM 688
            ||           |     |:.|::|   ||      |..:...:|..|.::..|:.:...:...
Yeast   780 DALLQRLSEFQSFWSSDPLQIRSKIMCTIDKVLDNSIYCKNSAFVEIGCLIVGKGLNLPDGEPYF 844

  Fly   689 LVEPLIKQM-VVLYSVQH---HSC---FLYVGSILVDEFAKS---------SECIGGLLEMLQAF 737
            |...:.:.| .||..|.:   .:|   |:|:...|:.||.|.         .|.|  ||....|:
Yeast   845 LKYNMSEVMNFVLRHVPNCELATCLPYFVYLLEKLISEFRKELTPQEFDFMFEKI--LLVYYDAY 907

  Fly   738 IEPTFGLLQMENGLKNNPDTVDDFFRLASRYLDCCPHQLLQSSLITPIFQCALIACSLDHREANS 802
            |.....||||..|..||...|.....:.|::         .:|.|.|.| ..||    ..||..:
Yeast   908 IINDPDLLQMTIGFVNNVLDVKPGLAIGSKH---------WTSFILPQF-LKLI----PSREKFT 958

  Fly   803 --SVMKFFINLLVWGRSNNHSRNTECRPLVVELASQHGGALVMNLI------QASVFQLHSY 856
              :|.||:..|:     ||...|.|....|.:..|..||.||..::      |.|  .|:||
Yeast   959 IVAVAKFWTKLI-----NNKKYNQEELTTVRQQVSSIGGDLVYQIMYGLFHTQRS--DLNSY 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tnpo-SRNP_001259961.1 IBN_N 28..94 CDD:281761 21/72 (29%)
Xpo1 100..248 CDD:285575 27/174 (16%)
HEAT repeat 427..454 CDD:293787 6/53 (11%)
HEAT repeat 462..496 CDD:293787 9/43 (21%)
HEAT repeat 506..531 CDD:293787 5/27 (19%)
KAP122NP_011499.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12363
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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