| Sequence 1: | NP_001259961.1 | Gene: | Tnpo-SR / 33465 | FlyBaseID: | FBgn0031456 | Length: | 932 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_445942.1 | Gene: | Xpo1 / 85252 | RGDID: | 620517 | Length: | 1071 | Species: | Rattus norvegicus |
| Alignment Length: | 1020 | Identity: | 170/1020 - (16%) |
|---|---|---|---|
| Similarity: | 352/1020 - (34%) | Gaps: | 287/1020 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 VDVVYQAISALFQGNNPKEQEKANKWLQDFQKSIYSWTIADELLHQKRDLHANYFAAQTMRNKIQ 70
Fly 71 NSFSELPPHTHESLRDSLITHIGQIDEQTDNVIVTQLSLAVADLALLMAS---------WREPIN 126
Fly 127 DLLVTLAPHQCAIWPLLEVLKVLPEE-----------IDSRYLRLG-ANRREEVHKQLDASAECV 179
Fly 180 LKFLCMCLQREDLDQQRVWNAALRT---YSAWLVIHAFPVSHVYNNAL-TQLAFRLLSLPETSGK 240
Fly 241 LHDNATECVCALLSCINTRQDGASDPESSFEAQ---LFGAVCM-------LETPYHLSVAH--ED 293
Fly 294 TDKTINYCRIF-------------------TSLCDAFFYDLLADAQKPHYSLKGLDLVLLCVGHF 339
Fly 340 DYEVAEITFHLWYKLSE---------------DLFQRNEDKLTVLFRPHIERLISALFRHSQMES 389
Fly 390 DHDGLIEENN---------------NFFDFRRKVSDLIKDVAFIVGSGACFKQMFHILQAPETTW 439
Fly 440 ESTEAALFIMQNVAKNI-LPDENEVIPKVVEAILNMSEQ-----THIAVRYTAILLIGELCDWIE 498
Fly 499 NHPESLEAVLNFLL-YALQQKNGLAPAAAIALTSICSACRQKMVCHISGLVEIARSLDSFQINND 562
Fly 563 VAIGLLKGISLILTRLPREQLQPALREIVGFQLQPLAQLVDSTGSTPQKGERTDPVYWIDRACAI 627
Fly 628 IRHTNPDVPDNVEHPTVAILNDAWQLISRVMDKYQSDLRIMERTCRLIRYGIRMVRKQAMMLVEP 692
Fly 693 -LIKQMVVLYSVQHHSC-------FLYVGSILVD---EFAKSSECIGG-------------LLEM 733
Fly 734 LQAFIEPTFGLLQMENGLKNNPDTVDDFFRLASRYLDCC-------------PHQLLQSSLIT-- 783
Fly 784 --------------PIFQCALIACSLDHREANSSVMKFFINLLVWGRSNNHSRNTECRPLVVELA 834
Fly 835 SQHGGALVMNLIQASVFQLHSYMLVDVA----EVLHELKQVVGNE 875 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Tnpo-SR | NP_001259961.1 | IBN_N | 28..94 | CDD:281761 | 14/65 (22%) |
| Xpo1 | 100..248 | CDD:285575 | 26/172 (15%) | ||
| HEAT repeat | 427..454 | CDD:293787 | 2/26 (8%) | ||
| HEAT repeat | 462..496 | CDD:293787 | 5/38 (13%) | ||
| HEAT repeat | 506..531 | CDD:293787 | 5/25 (20%) | ||
| Xpo1 | NP_445942.1 | CRM1 | 15..1044 | CDD:227432 | 170/1020 (17%) |
| HEAT 1 | 217..240 | 5/27 (19%) | |||
| HEAT 2 | 241..277 | 10/49 (20%) | |||
| Necessary for interaction with Ran and nuclear export complex formation. /evidence=ECO:0000250 | 327..450 | 23/140 (16%) | |||
| HEAT 3 | 354..472 | 22/135 (16%) | |||
| Necessary for interaction with RANBP3. /evidence=ECO:0000250 | 411..481 | 13/76 (17%) | |||
| HEAT 4 | 515..553 | 5/37 (14%) | |||
| HEAT 5 | 560..597 | 8/36 (22%) | |||
| HEAT 6 | 602..639 | 10/49 (20%) | |||
| HEAT 7 | 775..813 | 6/39 (15%) | |||
| HEAT 8 | 885..916 | 7/23 (30%) | |||
| HEAT 9 | 917..954 | ||||
| HEAT 10 | 1002..1039 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||