DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tnpo-SR and emb

DIOPT Version :9

Sequence 1:NP_001259961.1 Gene:Tnpo-SR / 33465 FlyBaseID:FBgn0031456 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_001303316.1 Gene:emb / 34167 FlyBaseID:FBgn0020497 Length:1063 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tnpo-SRNP_001259961.1 IBN_N 28..94 CDD:281761
Xpo1 100..248 CDD:285575
HEAT repeat 427..454 CDD:293787
HEAT repeat 462..496 CDD:293787
HEAT repeat 506..531 CDD:293787
embNP_001303316.1 CRM1 13..1023 CDD:227432
IBN_N 43..109 CDD:197981
Xpo1 120..265 CDD:285575
CRM1_C 701..1015 CDD:285920
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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